More than 300 homologs were found in PanDaTox collection
for query gene Saro_3842 on replicon NC_009426
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  100 
 
 
455 aa  953    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  54.02 
 
 
456 aa  500  1e-140  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  53.65 
 
 
448 aa  489  1e-137  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  55.21 
 
 
427 aa  480  1e-134  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  40.28 
 
 
450 aa  327  3e-88  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  39.47 
 
 
459 aa  323  5e-87  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  40.22 
 
 
450 aa  321  1.9999999999999998e-86  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  41.47 
 
 
456 aa  317  2e-85  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  39.69 
 
 
446 aa  317  3e-85  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  40.14 
 
 
497 aa  310  4e-83  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  38.85 
 
 
453 aa  303  3.0000000000000004e-81  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  38.85 
 
 
453 aa  303  3.0000000000000004e-81  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  40.69 
 
 
459 aa  303  3.0000000000000004e-81  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02394  hypothetical protein  38.85 
 
 
453 aa  303  3.0000000000000004e-81  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  38.85 
 
 
453 aa  303  3.0000000000000004e-81  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  38.85 
 
 
453 aa  303  4.0000000000000003e-81  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  38.62 
 
 
453 aa  301  1e-80  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  38.48 
 
 
435 aa  292  1e-77  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  35.25 
 
 
447 aa  270  4e-71  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  35.22 
 
 
447 aa  268  2e-70  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  35.16 
 
 
471 aa  257  3e-67  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  35.16 
 
 
467 aa  256  5e-67  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  32.44 
 
 
466 aa  254  3e-66  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  32.44 
 
 
466 aa  253  4.0000000000000004e-66  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  32.66 
 
 
466 aa  253  6e-66  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  32.66 
 
 
466 aa  253  6e-66  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  32.66 
 
 
466 aa  253  6e-66  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
471 aa  246  4.9999999999999997e-64  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
471 aa  246  8e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  34.31 
 
 
505 aa  244  1.9999999999999999e-63  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
458 aa  244  3e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
455 aa  244  3e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
458 aa  244  3e-63  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
455 aa  244  3e-63  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
455 aa  244  3e-63  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
455 aa  244  3e-63  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
458 aa  244  3e-63  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  35.45 
 
 
455 aa  243  3.9999999999999997e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
447 aa  239  8e-62  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
447 aa  239  8e-62  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  239  8e-62  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  239  9e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  239  9e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  238  1e-61  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  238  1e-61  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
463 aa  238  1e-61  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  32.4 
 
 
463 aa  237  4e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  34.01 
 
 
487 aa  236  6e-61  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  34.47 
 
 
468 aa  231  2e-59  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  36.6 
 
 
438 aa  231  2e-59  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  2e-59  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  36.6 
 
 
438 aa  231  3e-59  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  36.6 
 
 
438 aa  231  3e-59  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  30.26 
 
 
444 aa  230  3e-59  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  33.64 
 
 
484 aa  227  3e-58  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  33.64 
 
 
484 aa  227  3e-58  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  33.26 
 
 
483 aa  226  7e-58  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  33.18 
 
 
484 aa  225  1e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  33.33 
 
 
483 aa  225  1e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  32.95 
 
 
484 aa  224  3e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  32.19 
 
 
467 aa  220  3.9999999999999997e-56  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  30.47 
 
 
458 aa  215  9.999999999999999e-55  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  33.33 
 
 
423 aa  216  9.999999999999999e-55  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  31.29 
 
 
467 aa  213  4.9999999999999996e-54  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  30.63 
 
 
468 aa  204  2e-51  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  31.21 
 
 
424 aa  193  6e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1680  ring hydroxylating dioxygenase, alpha subunit  31.69 
 
 
447 aa  182  1e-44  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.801472  n/a   
 
 
-
 
NC_009511  Swit_1531  Rieske (2Fe-2S) domain-containing protein  30.71 
 
 
433 aa  169  6e-41  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0185016 
 
 
-
 
NC_009511  Swit_2634  benzoate 1,2-dioxygenase, alpha subunit  29.78 
 
 
450 aa  166  1.0000000000000001e-39  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5382  Rieske (2Fe-2S) domain protein  30.56 
 
 
438 aa  165  1.0000000000000001e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3192  putative ring hydroxylating dioxygenase, alpha subunit  30.21 
 
 
432 aa  164  3e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_37570  ring-hydroxylating dioxygenase, large terminal subunit  28.77 
 
 
424 aa  164  3e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.925134  normal 
 
 
-
 
NC_013441  Gbro_4158  benzoate 1,2-dioxygenase, large subunit  27.11 
 
 
475 aa  164  4.0000000000000004e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4882  benzoate 1,2-dioxygenase subunit alpha  28.89 
 
 
464 aa  162  8.000000000000001e-39  Cupriavidus metallidurans CH34  Bacteria  normal  0.179471  normal  0.342768 
 
 
-
 
NC_010515  Bcenmc03_3901  Rieske (2Fe-2S) domain-containing protein  29.45 
 
 
427 aa  161  2e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.812744 
 
 
-
 
NC_008543  Bcen2424_3619  Rieske (2Fe-2S) domain-containing protein  29.45 
 
 
427 aa  161  2e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0164916  normal 
 
 
-
 
NC_010512  Bcenmc03_6131  Rieske (2Fe-2S) domain-containing protein  29.32 
 
 
452 aa  161  3e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1306  Rieske (2Fe-2S) region  29.04 
 
 
452 aa  160  4e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6524  Rieske (2Fe-2S) domain-containing protein  29.04 
 
 
452 aa  160  4e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1364  Rieske (2Fe-2S) domain protein  29.78 
 
 
452 aa  160  6e-38  Ralstonia pickettii 12J  Bacteria  normal  0.0122744  normal  0.102172 
 
 
-
 
NC_007509  Bcep18194_C7046  ring hydroxylating dioxygenase, alpha subunit  28.85 
 
 
457 aa  159  1e-37  Burkholderia sp. 383  Bacteria  normal  normal  0.296981 
 
 
-
 
NC_008391  Bamb_5355  Rieske (2Fe-2S) domain-containing protein  28.74 
 
 
427 aa  159  1e-37  Burkholderia ambifaria AMMD  Bacteria  normal  0.569805  normal  0.872686 
 
 
-
 
NC_010086  Bmul_3238  Rieske (2Fe-2S) domain-containing protein  28.77 
 
 
452 aa  158  2e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.174297 
 
 
-
 
NC_007348  Reut_B4403  benzoate 1,2-dioxygenase, alpha subunit  29.67 
 
 
465 aa  158  2e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2496  ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein  28.5 
 
 
427 aa  158  2e-37  Burkholderia sp. 383  Bacteria  normal  0.0124288  normal 
 
 
-
 
NC_010623  Bphy_5352  benzoate 1,2-dioxygenase, large subunit  30.11 
 
 
455 aa  158  2e-37  Burkholderia phymatum STM815  Bacteria  normal  normal  0.587151 
 
 
-
 
NC_010681  Bphyt_1591  Rieske (2Fe-2S) domain protein  30.06 
 
 
452 aa  158  2e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  0.109039  normal 
 
 
-
 
NC_007794  Saro_0538  Rieske (2Fe-2S) protein  28.49 
 
 
444 aa  158  2e-37  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1177  Rieske (2Fe-2S) domain-containing protein  29.75 
 
 
452 aa  158  2e-37  Paracoccus denitrificans PD1222  Bacteria  normal  0.0599203  normal 
 
 
-
 
NC_010552  BamMC406_3525  Rieske (2Fe-2S) domain-containing protein  30.41 
 
 
427 aa  157  4e-37  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0996141 
 
 
-
 
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