| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2881 |
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| Symbol | |
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| ID | 5195399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3271737 |
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| End bp | 3273089 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587330 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_001268196 |
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| Protein GI | 148548094 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.912394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0432092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA CCGACACATC ACCTATCAGG CTGCGCAGGA GCTGGAACAC CAGCGAGATA
GAAGCGCTCT TTGACGAGCA TGCCGGACGT ATCGATCCGC GCATTTATAC CGATGAGGAT
CTGTACCAAC TCGAACTGGA GCGTGTCTTC GCCCGGTCCT GGCTGCTGTT GGGGCATGAA
ACCCAGATTC GCAAGCCGGG CGATTACATC ACGACCTACA TGGGTGAAGA CCCTGTCGTG
GTCGTCCGGC AGAAAGACGC CAGCATTGCC GTGTTCCTGA ACCAGTGCCG CCACCGTGGC
ATGCGCATCT GCCGCGCGGA TGCCGGAAAC GCGAAGGCGT TCACTTGCAG CTACCACGGG
TGGGCTTACG ACACCGCCGG CAATCTTGTC AATGTGCCTT ACGAGGCCGA ATCCTTCGCG
TGCCTGAACA AGAAGGAATG GAGCCCGCTG AAGGCCCGGG TAGAAACCTA CAAGGGCCTG
ATTTTCGCCA ACTGGGATGA GAACGCTGTA GACCTCGACA CGTATCTGGG CGAGGCGAAG
TTCTACATGG ACCACATGCT CGACCGCACC GAGGCCGGCA CCGAAGCGAT CCCGGGCGTG
CAGAAGTGGG TCATTCCCTG TAACTGGAAA TTCGCCGCAG AGCAGTTTTG CAGCGACATG
TACCATGCCG GGACGACCTC GCATCTGTCT GGCATCCTGG CAGGCCTGCC AGAAGACCTT
GAAATGGCCG ACCTTGCTCC GCCGACAGTT GGCAAGCAGT ACCGTGCGTC ATGGGGCGGA
CATGGAAGTG GCTTCTATGT CGGCGACCCC AATCTGATGC TTGCCATCAT GGGGCCAAAG
GTCACCAGCT ACTGGACCGA AGGCCCCGCG TCGGAAAAGG CGGCCGAACG TCTGGGTAGC
GTGGAGCGCG GCTCGAAACT CATGGTCGAG CACATGACCG TCTTCCCCAC GTGTTCCTTC
CTCCCAGGTA TCAATACGGT CCGGACATGG CATCCGCGCG GGCCGAACGA GGTCGAGGTA
TGGGCGTTTA CGGTGGTCGA TGCTGATGCT CCTGACGATA TCAAGGAAGA GTTCCGGCGC
CAGACGCTGC GCACCTTCTC TGCCGGTGGC GTGTTCGAGC AGGACGACGG GGAGAACTGG
GTCGAGATCC AGCACATCCT GCGAGGCCAC AAGGCGCGGA GCCGCCCTTT CAATGCCGAG
ATGAGCATGG ACCAGACCGT CGACAACGAC CCGGTTTACC CCGGGCGGAT CAGCAACAAC
GTCTACAGCG AGGAAGCTGC CCGCGGGCTC TATGCCCATT GGCTGCGGAT GATGACATCC
CCCGACTGGG ACGCGCTGAA GGCGACACGC TGA
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| Protein sequence | MNQTDTSPIR LRRSWNTSEI EALFDEHAGR IDPRIYTDED LYQLELERVF ARSWLLLGHE
TQIRKPGDYI TTYMGEDPVV VVRQKDASIA VFLNQCRHRG MRICRADAGN AKAFTCSYHG
WAYDTAGNLV NVPYEAESFA CLNKKEWSPL KARVETYKGL IFANWDENAV DLDTYLGEAK
FYMDHMLDRT EAGTEAIPGV QKWVIPCNWK FAAEQFCSDM YHAGTTSHLS GILAGLPEDL
EMADLAPPTV GKQYRASWGG HGSGFYVGDP NLMLAIMGPK VTSYWTEGPA SEKAAERLGS
VERGSKLMVE HMTVFPTCSF LPGINTVRTW HPRGPNEVEV WAFTVVDADA PDDIKEEFRR
QTLRTFSAGG VFEQDDGENW VEIQHILRGH KARSRPFNAE MSMDQTVDND PVYPGRISNN
VYSEEAARGL YAHWLRMMTS PDWDALKATR
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