More than 300 homologs were found in PanDaTox collection
for query gene Noca_0683 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  100 
 
 
424 aa  874    Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  35.87 
 
 
447 aa  271  2e-71  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  35.87 
 
 
447 aa  271  2e-71  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
463 aa  270  4e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
463 aa  270  4e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
463 aa  269  7e-71  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
463 aa  269  7e-71  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  35.63 
 
 
463 aa  269  7e-71  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  35.39 
 
 
463 aa  268  1e-70  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  35.39 
 
 
463 aa  268  2e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  34.27 
 
 
466 aa  236  8e-61  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  34.27 
 
 
466 aa  236  8e-61  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  34.27 
 
 
466 aa  236  8e-61  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  34.27 
 
 
466 aa  235  1.0000000000000001e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  34.04 
 
 
466 aa  234  2.0000000000000002e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  34.91 
 
 
458 aa  233  4.0000000000000004e-60  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  33.02 
 
 
444 aa  232  8.000000000000001e-60  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  34.75 
 
 
455 aa  231  2e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
458 aa  230  3e-59  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
455 aa  231  3e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
458 aa  230  3e-59  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
455 aa  230  4e-59  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
455 aa  230  4e-59  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  34.52 
 
 
455 aa  230  4e-59  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  1e-58  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
438 aa  228  2e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  33.33 
 
 
468 aa  219  6e-56  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  31.07 
 
 
487 aa  216  5.9999999999999996e-55  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  31.96 
 
 
467 aa  213  5.999999999999999e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  30.72 
 
 
484 aa  207  3e-52  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  30.72 
 
 
484 aa  207  3e-52  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  30.72 
 
 
483 aa  207  3e-52  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  30.21 
 
 
483 aa  206  5e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  31.89 
 
 
459 aa  205  1e-51  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  29.7 
 
 
458 aa  202  9e-51  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  30.02 
 
 
484 aa  202  9.999999999999999e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  30.02 
 
 
484 aa  201  3e-50  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  31.81 
 
 
468 aa  198  2.0000000000000003e-49  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  32.61 
 
 
448 aa  196  5.000000000000001e-49  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  31.41 
 
 
467 aa  194  2e-48  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  31.02 
 
 
447 aa  193  4e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  31.21 
 
 
455 aa  193  6e-48  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  31.38 
 
 
456 aa  192  7e-48  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  33.26 
 
 
427 aa  192  8e-48  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  31.63 
 
 
423 aa  187  4e-46  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  29.74 
 
 
447 aa  182  7e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  30.72 
 
 
467 aa  181  1e-44  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  30.72 
 
 
471 aa  181  2e-44  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  29.89 
 
 
471 aa  180  4e-44  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  29.45 
 
 
471 aa  179  1e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  28.44 
 
 
446 aa  176  9.999999999999999e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  29.74 
 
 
456 aa  174  1.9999999999999998e-42  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  30.12 
 
 
497 aa  174  1.9999999999999998e-42  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  29.72 
 
 
505 aa  174  1.9999999999999998e-42  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  29.77 
 
 
450 aa  172  1e-41  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4174  Rieske (2Fe-2S) domain-containing protein  33.5 
 
 
440 aa  172  1e-41  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.000409814  normal  0.0305498 
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  30.7 
 
 
459 aa  171  3e-41  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5382  Rieske (2Fe-2S) domain protein  32.74 
 
 
438 aa  165  1.0000000000000001e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  28.6 
 
 
453 aa  165  2.0000000000000002e-39  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  28.6 
 
 
453 aa  164  3e-39  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  28.6 
 
 
453 aa  164  3e-39  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3192  putative ring hydroxylating dioxygenase, alpha subunit  31.57 
 
 
432 aa  164  3e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02394  hypothetical protein  28.6 
 
 
453 aa  164  3e-39  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  28.6 
 
 
453 aa  164  3e-39  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  29.88 
 
 
453 aa  164  4.0000000000000004e-39  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  28.97 
 
 
450 aa  163  4.0000000000000004e-39  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_009427  Saro_3814  Rieske (2Fe-2S) domain-containing protein  40 
 
 
430 aa  162  8.000000000000001e-39  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.387965  n/a   
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  29.78 
 
 
435 aa  162  1e-38  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_009077  Mjls_4071  Rieske (2Fe-2S) domain-containing protein  32.31 
 
 
429 aa  160  6e-38  Mycobacterium sp. JLS  Bacteria  normal  0.177236  normal 
 
 
-
 
NC_009511  Swit_4188  Rieske (2Fe-2S) domain-containing protein  30.81 
 
 
429 aa  157  4e-37  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0795618 
 
 
-
 
NC_009511  Swit_1874  Rieske (2Fe-2S) domain-containing protein  30.87 
 
 
436 aa  155  1e-36  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1267  Rieske (2Fe-2S) region  28.8 
 
 
460 aa  154  2.9999999999999998e-36  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0826  Rieske (2Fe-2S) domain-containing protein  29.27 
 
 
443 aa  154  2.9999999999999998e-36  Nocardioides sp. JS614  Bacteria  normal  0.212221  n/a   
 
 
-
 
NC_008146  Mmcs_1373  Rieske (2Fe-2S) region  29.49 
 
 
462 aa  153  4e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1391  Rieske (2Fe-2S) domain-containing protein  29.49 
 
 
462 aa  153  4e-36  Mycobacterium sp. KMS  Bacteria  normal  0.109638  normal 
 
 
-
 
NC_010681  Bphyt_1591  Rieske (2Fe-2S) domain protein  28.57 
 
 
452 aa  152  1e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  0.109039  normal 
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  29.2 
 
 
449 aa  152  1e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1407  Rieske (2Fe-2S) domain-containing protein  29.22 
 
 
462 aa  150  3e-35  Mycobacterium sp. JLS  Bacteria  normal  0.0632088  normal 
 
 
-
 
NC_007650  BTH_II0473  benzoate 1,2-dioxygenase, alpha subunit  30.08 
 
 
455 aa  150  4e-35  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1297  benzoate 1,2-dioxygenase, large subunit  28.73 
 
 
458 aa  150  6e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1324  benzoate 1,2-dioxygenase, large subunit  29.75 
 
 
442 aa  149  7e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0648485 
 
 
-
 
NC_009654  Mmwyl1_1826  Rieske (2Fe-2S) domain-containing protein  29.82 
 
 
429 aa  149  8e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.942727 
 
 
-
 
NC_008781  Pnap_2112  Rieske (2Fe-2S) domain-containing protein  28.97 
 
 
463 aa  147  3e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.206436  normal  0.278449 
 
 
-
 
NC_009511  Swit_2634  benzoate 1,2-dioxygenase, alpha subunit  30.4 
 
 
450 aa  147  4.0000000000000006e-34  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5352  benzoate 1,2-dioxygenase, large subunit  28.27 
 
 
455 aa  147  5e-34  Burkholderia phymatum STM815  Bacteria  normal  normal  0.587151 
 
 
-
 
NC_007650  BTH_II0327  benzoate 1,2-dioxygenase, alpha subunit  36.51 
 
 
427 aa  146  6e-34  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1355  Rieske (2Fe-2S) domain-containing protein  29.46 
 
 
456 aa  146  6e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.141435  normal  0.0753315 
 
 
-
 
NC_009078  BURPS1106A_A2581  benzoate 1,2 dioxygenase, alpha subunit  29.82 
 
 
455 aa  146  8.000000000000001e-34  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
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