| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2581 |
|---|
| Symbol | benA |
|---|
| ID | 4904300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2534768 |
|---|
| End bp | 2536135 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640145684 |
|---|
| Product | benzoate 1,2 dioxygenase, alpha subunit |
|---|
| Protein accession | YP_001076611 |
|---|
| Protein GI | 126455683 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGA TCGACCCGGA CCGCCGTGCG ACGCCGCGCC CCATCGACGA TTTCCTCGTC
GAAGACAAGG CGCGCGGCGA CTACCGGCTG CACCGCAGCG CGTTCACCGA CGAAATGCTG
TTCGAGCTCG AGATGAAGCA CATCTTCGAA GGCAACTGGA TCTATCTCGC GCACGAGAGC
CAGCTCCCGA ACGCGAACGA TTACTACACG ACCACGATCG GCCGCCAGCC GATCGTGATC
GCGCGCAACC GCCACGGCGA GCTGAACGCG TTCGTCAACG CCTGCACGCA CCGCGGCGCG
ATGCTGTGCC GCCACAAGCG CGGCAACCGC GCGAGCTACA CGTGCCCGTT CCACGGCTGG
ACGTTCAGCA ACGGCGGCAA GCTGCTCAAA GTAAAGGACC CCGAAGGAGC CGGCTACCCG
GACTGCTTCA ACCGCGACGG CTCGCACGAT CTGAAGAAAG TCGCGCGCTT CGAGAACTAT
CGCGGCTTCC TGTTCGGCAG CCTGAACCCC GAAGTCGAGC CGCTCGCCGC GCATCTCGGC
GATGCCGCGC GCATCATCGA CATGATCGTC GATCAGTCGG CGGACGGCCT CGAGGTGCTG
CGCGGCTCGT CGACGTACAC GTACGAAGGC AACTGGAAGC TCACCGCCGA GAACGGCGCG
GACGGCTACC ACGTATCGGC CGTTCACTGG AACTACGCGG CGACCGTCAA CCACCGCAAG
ACCGACGCGC AGCACGAAGA CACGATCCGC GCGATGGACG CGGGCAACTG GGGCCGGCAG
GGCGGCGGCT TCTACGCGTT CGATCACGGC CACATGCTGC TGTGGACGCG CTGGGCGAAC
CCGGAGGACC GGCCGAACTT CGATCGCCGC GACGAATTCG CCGCGCGCTG CGGCGGCGAC
GTCGCCGACT GGATGATCCG GAACTCGCGC AACCTGTGCC TGTACCCGAA CGTCTATCTG
ATGGACCAGT TCGGCTCGCA GATCCGCGTG CTGCGCCCGC TCGCCGTCGA TCGCACCGAG
GTCACGATCT ACTGCATCGC GCCGAAGGGC GAGGCGCCCG ACGCGCGCGC GCGGCGCATC
CGCCAGTACG AGGATTTCTT CAACGCGAGC GGAATGGCGA CGCCCGACGA TCTCGAGGAA
TTCCGCGCGT GCCAGCAGGG CTACGCGGGC CGCGCGGTCG AATGGAACGA CATGTGCCGC
GGCGCCTCGC ACTGGATCGA GGGCCCCGAC GAAGCGGCGC GCCGGATCGG CATCCGCCCG
CTGATGAGCG GCGTGAAGAC CGAAGACGAA GGGCTGTACA CGGTCCAGCA CCGCTACTGG
ATCGCGACGA TGAAGCAGGC GCTCGCCGCC GAAAGGAGCG GCGCATGA
|
|---|
| Protein sequence | MIPIDPDRRA TPRPIDDFLV EDKARGDYRL HRSAFTDEML FELEMKHIFE GNWIYLAHES
QLPNANDYYT TTIGRQPIVI ARNRHGELNA FVNACTHRGA MLCRHKRGNR ASYTCPFHGW
TFSNGGKLLK VKDPEGAGYP DCFNRDGSHD LKKVARFENY RGFLFGSLNP EVEPLAAHLG
DAARIIDMIV DQSADGLEVL RGSSTYTYEG NWKLTAENGA DGYHVSAVHW NYAATVNHRK
TDAQHEDTIR AMDAGNWGRQ GGGFYAFDHG HMLLWTRWAN PEDRPNFDRR DEFAARCGGD
VADWMIRNSR NLCLYPNVYL MDQFGSQIRV LRPLAVDRTE VTIYCIAPKG EAPDARARRI
RQYEDFFNAS GMATPDDLEE FRACQQGYAG RAVEWNDMCR GASHWIEGPD EAARRIGIRP
LMSGVKTEDE GLYTVQHRYW IATMKQALAA ERSGA
|
|---|
| |