More than 300 homologs were found in PanDaTox collection
for query gene Mflv_0558 on replicon NC_009338
Organism: Mycobacterium gilvum PYR-GCK



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  99.78 
 
 
463 aa  959    Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  99.78 
 
 
463 aa  959    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  100 
 
 
463 aa  961    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  99.33 
 
 
447 aa  925    Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  99.78 
 
 
463 aa  959    Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  99.78 
 
 
463 aa  959    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  99.33 
 
 
447 aa  925    Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  100 
 
 
463 aa  961    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  99.57 
 
 
463 aa  959    Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  62.74 
 
 
466 aa  575  1.0000000000000001e-163  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  63.57 
 
 
466 aa  577  1.0000000000000001e-163  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  62.74 
 
 
466 aa  575  1.0000000000000001e-163  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  62.97 
 
 
466 aa  575  1.0000000000000001e-163  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  62.74 
 
 
466 aa  575  1.0000000000000001e-163  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  53.08 
 
 
455 aa  486  1e-136  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  53.3 
 
 
455 aa  486  1e-136  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  52.85 
 
 
455 aa  481  1e-135  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  53.09 
 
 
458 aa  484  1e-135  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  52.85 
 
 
455 aa  481  1e-135  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  52.85 
 
 
455 aa  481  1e-135  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  53.09 
 
 
458 aa  484  1e-135  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  53.09 
 
 
458 aa  483  1e-135  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  43.06 
 
 
444 aa  392  1e-108  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  37.99 
 
 
487 aa  310  2.9999999999999997e-83  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  39.36 
 
 
484 aa  306  7e-82  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  39.13 
 
 
484 aa  304  2.0000000000000002e-81  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  39.13 
 
 
484 aa  304  2.0000000000000002e-81  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  38.67 
 
 
484 aa  303  5.000000000000001e-81  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  38.81 
 
 
483 aa  303  5.000000000000001e-81  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  38.58 
 
 
483 aa  302  1e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  38.3 
 
 
467 aa  302  1e-80  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  36.41 
 
 
424 aa  268  1e-70  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  37.56 
 
 
456 aa  261  2e-68  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  34.17 
 
 
468 aa  248  2e-64  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  35.83 
 
 
459 aa  248  2e-64  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  35.77 
 
 
453 aa  246  9e-64  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  33.25 
 
 
446 aa  245  9.999999999999999e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  35.77 
 
 
453 aa  245  1.9999999999999999e-63  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  35.77 
 
 
453 aa  245  1.9999999999999999e-63  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02394  hypothetical protein  35.77 
 
 
453 aa  245  1.9999999999999999e-63  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  35.77 
 
 
453 aa  244  1.9999999999999999e-63  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  35.77 
 
 
453 aa  245  1.9999999999999999e-63  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  34.25 
 
 
450 aa  244  1.9999999999999999e-63  Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
455 aa  244  3e-63  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  32.86 
 
 
459 aa  242  7.999999999999999e-63  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  31.66 
 
 
458 aa  241  2e-62  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  32.01 
 
 
450 aa  238  2e-61  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  33.18 
 
 
447 aa  236  7e-61  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  33.33 
 
 
447 aa  233  6e-60  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  34.27 
 
 
427 aa  233  7.000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  32.46 
 
 
448 aa  226  5.0000000000000005e-58  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  31.97 
 
 
497 aa  223  4e-57  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  30.44 
 
 
456 aa  223  4.9999999999999996e-57  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  32.73 
 
 
435 aa  220  3.9999999999999997e-56  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  29.37 
 
 
468 aa  215  1.9999999999999998e-54  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  28.57 
 
 
467 aa  212  1e-53  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  31.37 
 
 
438 aa  207  4e-52  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  31.37 
 
 
438 aa  207  4e-52  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  31.37 
 
 
438 aa  207  4e-52  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  31.37 
 
 
438 aa  207  4e-52  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  31.37 
 
 
438 aa  207  4e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  31.37 
 
 
438 aa  207  4e-52  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  31.15 
 
 
438 aa  204  2e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  30.28 
 
 
471 aa  204  3e-51  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  31.15 
 
 
438 aa  204  4e-51  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  31.15 
 
 
438 aa  204  4e-51  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  30.54 
 
 
505 aa  204  4e-51  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  30.13 
 
 
467 aa  203  5e-51  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  30.13 
 
 
471 aa  203  5e-51  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  28.87 
 
 
471 aa  198  2.0000000000000003e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  28.77 
 
 
423 aa  173  5e-42  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_010086  Bmul_3238  Rieske (2Fe-2S) domain-containing protein  27.61 
 
 
452 aa  170  5e-41  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.174297 
 
 
-
 
NC_007969  Pcryo_1267  Rieske (2Fe-2S) region  27.69 
 
 
460 aa  170  6e-41  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6299  Rieske (2Fe-2S) domain-containing protein  28 
 
 
452 aa  166  8e-40  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00410726 
 
 
-
 
NC_008686  Pden_1177  Rieske (2Fe-2S) domain-containing protein  27.27 
 
 
452 aa  166  9e-40  Paracoccus denitrificans PD1222  Bacteria  normal  0.0599203  normal 
 
 
-
 
NC_007974  Rmet_4882  benzoate 1,2-dioxygenase subunit alpha  27.65 
 
 
464 aa  166  1.0000000000000001e-39  Cupriavidus metallidurans CH34  Bacteria  normal  0.179471  normal  0.342768 
 
 
-
 
NC_012856  Rpic12D_1428  Rieske (2Fe-2S) domain protein  27.29 
 
 
452 aa  166  1.0000000000000001e-39  Ralstonia pickettii 12D  Bacteria  normal  0.0496525  normal  0.359815 
 
 
-
 
NC_008699  Noca_0826  Rieske (2Fe-2S) domain-containing protein  37.26 
 
 
443 aa  164  2.0000000000000002e-39  Nocardioides sp. JS614  Bacteria  normal  0.212221  n/a   
 
 
-
 
NC_008392  Bamb_6584  Rieske (2Fe-2S) domain-containing protein  27.73 
 
 
452 aa  164  3e-39  Burkholderia ambifaria AMMD  Bacteria  normal  0.208794  normal  0.710082 
 
 
-
 
NC_009511  Swit_1531  Rieske (2Fe-2S) domain-containing protein  29.9 
 
 
433 aa  164  4.0000000000000004e-39  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0185016 
 
 
-
 
NC_012560  Avin_08590  Benzoate-1,2-dioxygenase oxygenase component, alpha subunit  27.23 
 
 
453 aa  164  4.0000000000000004e-39  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1591  Rieske (2Fe-2S) domain protein  27.23 
 
 
452 aa  164  4.0000000000000004e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  0.109039  normal 
 
 
-
 
NC_010682  Rpic_1364  Rieske (2Fe-2S) domain protein  26.93 
 
 
452 aa  163  6e-39  Ralstonia pickettii 12J  Bacteria  normal  0.0122744  normal  0.102172 
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  25.75 
 
 
449 aa  162  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7046  ring hydroxylating dioxygenase, alpha subunit  28.12 
 
 
457 aa  160  3e-38  Burkholderia sp. 383  Bacteria  normal  normal  0.296981 
 
 
-
 
NC_007348  Reut_B4403  benzoate 1,2-dioxygenase, alpha subunit  27.2 
 
 
465 aa  160  7e-38  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_32080  toluate 1,2-dioxygenase alpha subunit  27.69 
 
 
455 aa  159  1e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0473  benzoate 1,2-dioxygenase, alpha subunit  27.42 
 
 
455 aa  158  2e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4158  benzoate 1,2-dioxygenase, large subunit  25.38 
 
 
475 aa  158  2e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1306  Rieske (2Fe-2S) region  27.25 
 
 
452 aa  158  2e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6131  Rieske (2Fe-2S) domain-containing protein  27.51 
 
 
452 aa  158  2e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6524  Rieske (2Fe-2S) domain-containing protein  27.25 
 
 
452 aa  158  2e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1324  benzoate 1,2-dioxygenase, large subunit  25.92 
 
 
442 aa  156  7e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0648485 
 
 
-
 
NC_010681  Bphyt_2156  Rieske (2Fe-2S) domain protein  26.91 
 
 
427 aa  155  1e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2112  Rieske (2Fe-2S) domain-containing protein  27.72 
 
 
463 aa  155  1e-36  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.206436  normal  0.278449 
 
 
-
 
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