| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4882 |
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| Symbol | benA |
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| ID | 4041744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1544108 |
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| End bp | 1545502 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980303 |
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| Product | benzoate 1,2-dioxygenase subunit alpha |
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| Protein accession | YP_587013 |
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| Protein GI | 94313804 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.179471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.342768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGA TCCATCTGGA TACCGGGGCG GGCCCCGCTC GTCCCCAGCA TCAGCCCAAC
CGCCTGGAGA ACCTTGACCA GTTCCTGGTC GAAGACAAGA CCACCGGCGA CTATCGGCTG
CACCGCAGCG CGTTCACGGA CGAGGCGCTG TTCGAACTCG AGATGCAGCA CATCTTCGAG
GGCAACTGGA TCTACCTGGC GCACGAAAGC CAGATCCCGA ACAACAACGA TTACTACACG
ACGCATATCG GCCGCCAGCC GATCGTGATC GCGCGCAATC GCCAGGGCGA ACTGAACGCG
TTCATCAACG CGTGCAGCCA TCGCGGCGCA ATGTTGTGCC GGCACAAGCG CGGCAACAAG
GCCACATACA CCTGCCCGTT CCACGGCTGG ACATTCAACA ACAGCGGCAA GCTACTCAAG
GTCAAGGACC CCGAACAGGC CGGCTATCCG GAATGCTTCA ACAAGGAGGG GTCCCACGAC
CTGAAGAAGC TGGCGCGCTT TTCCAACTAT CGCGGCTTCC TGTTCGGCAG CCTCAACGCC
GATGTGCCGC CGATCGAGCA GTTCCTGGGC GATGCCGCGC GCATCATCGA CATGATTGTC
GACCAGTCGC CCGATGGTCT CGAGGTGCTG CGTGGCTCGT CGACATACAC ATTCGCCGGC
AACTGGAAAC TGCAGGCCGA GAATGGCGCC GATGGCTACC ATGTGTCCGC CGTGCACTGG
AACTACGCCG CCACCACAAG CCACCGCAAG CAGCAGAACG AACGCGAGGA CAAGATCCGC
GCGATGGATG CGGGCAAGTG GGGCCAGCAA GGCGGCGGCT TCTACGCGTT CGATCATGGC
CATATGCTGC TGTGGTCGCG CTGGGCTAAC CCGGAAGATC GTCCGAACTT CGCCCGCCGC
GACGAGTTCG CGCAACGCTG TGGCGAGGAG CGCGCCGACT GGATGATCCA GAACTCGCGC
AACCTGTGCC TGTACCCCAA TGTCTACCTG ATGGACCAGT TCGGCTCGCA GATCCGCCTG
CTGCGCCCGC TGTCGGTGGA CCGCACCGAA GTCACGATCT ACTGCATCGC CCCCAAGGGG
GAATCGGACG AGGCCCGCGC ACGCCGCATC CGCCAATACG AAGACTTTTT CAACGTCAGC
GGCATGGCCA CGCCCGACGA CCTCGAGGAG TTCCGCGCCT GCCAGCAGGG CTACGCGGGC
CAGGCACTGG CCTGGAACGA TATGTGCCGG GGCGCCACGC ACTGGATCGA CGGGCCCGAC
GACGCAGCGA AGCACATCGG TCTGAATCCG GTGATGAGCG GGCTGCGTAC CGAGGATGAA
GGCCTCTATA CCGTACAGCA TCGCTACTGG CTGGAGACGA TGAAGCGGGC CGTGGCACAG
GGAGATGCAG CATGA
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| Protein sequence | MIPIHLDTGA GPARPQHQPN RLENLDQFLV EDKTTGDYRL HRSAFTDEAL FELEMQHIFE
GNWIYLAHES QIPNNNDYYT THIGRQPIVI ARNRQGELNA FINACSHRGA MLCRHKRGNK
ATYTCPFHGW TFNNSGKLLK VKDPEQAGYP ECFNKEGSHD LKKLARFSNY RGFLFGSLNA
DVPPIEQFLG DAARIIDMIV DQSPDGLEVL RGSSTYTFAG NWKLQAENGA DGYHVSAVHW
NYAATTSHRK QQNEREDKIR AMDAGKWGQQ GGGFYAFDHG HMLLWSRWAN PEDRPNFARR
DEFAQRCGEE RADWMIQNSR NLCLYPNVYL MDQFGSQIRL LRPLSVDRTE VTIYCIAPKG
ESDEARARRI RQYEDFFNVS GMATPDDLEE FRACQQGYAG QALAWNDMCR GATHWIDGPD
DAAKHIGLNP VMSGLRTEDE GLYTVQHRYW LETMKRAVAQ GDAA
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