| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1177 |
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| Symbol | |
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| ID | 4579942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1148433 |
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| End bp | 1149791 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639768493 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_914978 |
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| Protein GI | 119383922 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0599203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGA TCATCGAAAA GGCACGCGAC CTGGATCATC TGCTGGCAAC GGCCGTGCAG
GACGACAAGG AGGCCGGCCT CTACCGCTGC CGCCGCGACA TCTTCACCAA CGAGGATCTG
TTCGCGCTGG AGATGAAGCA CATCTTCGAA GGCAACTGGG TCTATCTGGC GCATGAAAGC
CAGATCCCCG AAACCAACGA CTATTATACC ACCTGGATCG GCCGCCAGCC GGTGGTCATC
ACCCGCGACA AGACCGGCGC GCTGAATGCG GTCATCAATG CCTGCGCCCA CAAGGGCGCC
ATGCTGTGCC GCCGCAAGCA GGGCAACAAG GGCAGCTTCA CCTGTCCGTT CCACGGCTGG
ACCTTTTCCA ACACCGGCAA GCTGCTGAAG GTCAAGGATG CCAGGACCAC GCAATATCCC
GACCAGTTCG GCAAGGACGG GTCGCACGAC CTGACCCGCG TGGCCCGCTT TGAAAGCTAT
CGCGGCTTCC TGTTCGGCAG CCTTGATCCC GATGTGGCCT CCCTGGACGA ATTCCTGGGG
GAAACGAAGA TCATCATCGA CCAGATCGTC GACCAGGCCC CCGAGGGGCT GGAGGTTCTG
CGCGGCAATT CCTCCTACAT CTATGACGGC AACTGGAAGC TGCAGATGGA AAACGGCTGC
GACGGCTATC ACGTCAGCTC GGTCCACTGG AACTATGCCA CCACCATGGA GCGCCGCAGC
GAAACCGGCA CCAAGGCGGT CGATGCCAAC AGCTGGAGCA AGTCCGTCGC CGGCGTCTAT
GGTTTCGAGA ACGGCCATAT CCTGCTGTGG ACCAACACGA AGAACCCCGA GGTCCGCCCG
GTCTATAACC GCCGCGAGGA AATCGCCGCC CGGCTGGGCG AAGAGAAGGC GGGCTTCATC
GTCAACCAGA CGCGCAACCT GTGCATCTAT CCGAACGTGT TCCTGATGGA CCAGTTCAGC
ACCCAGATCC GCGTCGTGCG CCCGCTTTCC GTGGACAAGA CCGAAGTCAC CATCTTCTGC
TTCGCTCCCA AGGGGGAAAG CGCCGAGGAT CGCGCCCATC GCATCCGCCA ATACGAGGAT
TTCTTCAACG TCTCGGGCAT GGGCACCTCG GACGACCTGG AGGAATTCCG TGCCTGCCAG
ACCGGCTATG CGGGCACCGT GACCCTGTGG AACGACATGT CGCGAGGTGC GCCCCTCTGG
ATCGACGGGC CGGACGAAAA TGCCCGGCGC ATGGGGCTGA AGCCGCTTCT GTCCGGCGAG
CGTAGCGAGG ACGAGGGGCT GTTCGTCTGC CAGCACGAAT ACTGGGCCAA GGTGATGCGC
GAGGCGCTGT CGGCCGAAAA GATCGGAGCC GTCGCATGA
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| Protein sequence | MSAIIEKARD LDHLLATAVQ DDKEAGLYRC RRDIFTNEDL FALEMKHIFE GNWVYLAHES
QIPETNDYYT TWIGRQPVVI TRDKTGALNA VINACAHKGA MLCRRKQGNK GSFTCPFHGW
TFSNTGKLLK VKDARTTQYP DQFGKDGSHD LTRVARFESY RGFLFGSLDP DVASLDEFLG
ETKIIIDQIV DQAPEGLEVL RGNSSYIYDG NWKLQMENGC DGYHVSSVHW NYATTMERRS
ETGTKAVDAN SWSKSVAGVY GFENGHILLW TNTKNPEVRP VYNRREEIAA RLGEEKAGFI
VNQTRNLCIY PNVFLMDQFS TQIRVVRPLS VDKTEVTIFC FAPKGESAED RAHRIRQYED
FFNVSGMGTS DDLEEFRACQ TGYAGTVTLW NDMSRGAPLW IDGPDENARR MGLKPLLSGE
RSEDEGLFVC QHEYWAKVMR EALSAEKIGA VA
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