More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C1197 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007953  Bxe_C1197  biphenyl 2,3-dioxygenase alpha subunit (BphA1)  100 
 
 
459 aa  962    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2881  ring hydroxylating dioxygenase, alpha subunit  64.84 
 
 
450 aa  636    Pseudomonas putida F1  Bacteria  normal  0.912394  normal  0.0432092 
 
 
-
 
NC_008757  Pnap_4152  ring hydroxylating dioxygenase, alpha subunit  89.98 
 
 
456 aa  877    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.424226  normal  0.388878 
 
 
-
 
CP001509  ECD_02430  3-phenylpropionate dioxygenase, large (alpha) subunit  46.71 
 
 
453 aa  392  1e-108  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1130  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  46.71 
 
 
453 aa  392  1e-108  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02394  hypothetical protein  46.71 
 
 
453 aa  392  1e-108  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2691  3-phenylpropionate dioxygenase alpha subunit  46.71 
 
 
453 aa  392  1e-108  Escherichia coli SMS-3-5  Bacteria  normal  0.244955  normal 
 
 
-
 
NC_010468  EcolC_1139  aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  46.71 
 
 
453 aa  392  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2690  3-phenylpropionate dioxygenase alpha subunit  46.49 
 
 
453 aa  390  1e-107  Escherichia coli HS  Bacteria  normal  0.163483  n/a   
 
 
-
 
NC_008726  Mvan_4415  ring hydroxylating dioxygenase, alpha subunit  46.36 
 
 
446 aa  387  1e-106  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.415837  normal 
 
 
-
 
NC_009511  Swit_0890  ring hydroxylating dioxygenase, alpha subunit  40.63 
 
 
497 aa  326  4.0000000000000003e-88  Sphingomonas wittichii RW1  Bacteria  normal  0.145074  normal  0.391683 
 
 
-
 
NC_009508  Swit_4897  ring hydroxylating dioxygenase, alpha subunit  40.27 
 
 
435 aa  322  9.999999999999999e-87  Sphingomonas wittichii RW1  Bacteria  normal  0.227325  normal  0.4666 
 
 
-
 
NC_007298  Daro_3246  ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region  40.48 
 
 
456 aa  315  9.999999999999999e-85  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000178778  normal 
 
 
-
 
NC_012560  Avin_42190  aromatic ring hydroxylating dioxygenase, alpha subunit  40.37 
 
 
448 aa  310  5e-83  Azotobacter vinelandii DJ  Bacteria  normal  0.0579776  n/a   
 
 
-
 
NC_013739  Cwoe_0435  Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like protein  41.67 
 
 
427 aa  309  8e-83  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00493775 
 
 
-
 
NC_009426  Saro_3842  ring hydroxylating dioxygenase, alpha subunit  40.69 
 
 
455 aa  303  3.0000000000000004e-81  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3901  ring hydroxylating dioxygenase, alpha subunit  39.41 
 
 
459 aa  301  2e-80  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.682799  n/a   
 
 
-
 
NC_009426  Saro_3840  ring hydroxylating dioxygenase, alpha subunit  37.08 
 
 
450 aa  293  5e-78  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008538  Arth_4346  Rieske (2Fe-2S) domain-containing protein  35.96 
 
 
505 aa  269  1e-70  Arthrobacter sp. FB24  Bacteria  normal  0.23778  n/a   
 
 
-
 
NC_013946  Mrub_2685  Aromatic-ring-hydroxylating dioxygenase subunit alpha  35.14 
 
 
444 aa  265  1e-69  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.136091 
 
 
-
 
NC_008147  Mmcs_5450  ring hydroxylating dioxygenase, alpha subunit  36.52 
 
 
471 aa  263  4.999999999999999e-69  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5847  ring hydroxylating dioxygenase, alpha subunit  36.52 
 
 
467 aa  263  4.999999999999999e-69  Mycobacterium sp. KMS  Bacteria  normal  0.0153324  normal 
 
 
-
 
NC_008705  Mkms_1698  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium sp. KMS  Bacteria  normal  normal  0.362681 
 
 
-
 
NC_009077  Mjls_1647  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium sp. JLS  Bacteria  normal  0.355106  normal 
 
 
-
 
NC_009338  Mflv_0632  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.647669  normal 
 
 
-
 
NC_008146  Mmcs_1673  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0550  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5647  ring hydroxylating dioxygenase, alpha subunit  36.38 
 
 
471 aa  261  2e-68  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0533  ring hydroxylating dioxygenase, alpha subunit  36.07 
 
 
471 aa  259  5.0000000000000005e-68  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.379734  normal 
 
 
-
 
NC_009338  Mflv_0626  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  3e-67  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008147  Mmcs_5441  Rieske (2Fe-2S) region  35.68 
 
 
438 aa  257  3e-67  Mycobacterium sp. MCS  Bacteria  normal  0.0352555  normal  0.90702 
 
 
-
 
NC_008704  Mkms_5838  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  3e-67  Mycobacterium sp. KMS  Bacteria  normal  0.1481  normal 
 
 
-
 
NC_008705  Mkms_1709  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  4e-67  Mycobacterium sp. KMS  Bacteria  normal  0.211814  normal  0.573213 
 
 
-
 
NC_008726  Mvan_0539  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  4e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0984806  normal 
 
 
-
 
NC_009338  Mflv_0544  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  4e-67  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1680  Rieske (2Fe-2S) region  35.68 
 
 
438 aa  257  4e-67  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1653  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  4e-67  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5610  Rieske (2Fe-2S) domain-containing protein  35.68 
 
 
438 aa  257  4e-67  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0488  ring hydroxylating dioxygenase, alpha subunit  35.16 
 
 
455 aa  250  4e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0662  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
455 aa  249  6e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0567  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
458 aa  249  9e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2237  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
458 aa  249  9e-65  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1668  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
455 aa  248  1e-64  Mycobacterium sp. KMS  Bacteria  normal  0.779225  normal 
 
 
-
 
NC_009077  Mjls_1617  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
455 aa  248  1e-64  Mycobacterium sp. JLS  Bacteria  normal  0.541424  normal 
 
 
-
 
NC_008146  Mmcs_1642  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
455 aa  248  1e-64  Mycobacterium sp. MCS  Bacteria  normal  0.973879  n/a   
 
 
-
 
NC_008703  Mkms_5626  ring hydroxylating dioxygenase, alpha subunit  34.95 
 
 
458 aa  248  1e-64  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5855  ring hydroxylating dioxygenase, alpha subunit  35.56 
 
 
447 aa  245  9.999999999999999e-64  Mycobacterium sp. KMS  Bacteria  normal  0.0274508  normal 
 
 
-
 
NC_008147  Mmcs_5458  ring hydroxylating dioxygenase, alpha subunit  35.56 
 
 
447 aa  245  9.999999999999999e-64  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0558  ring hydroxylating dioxygenase, alpha subunit  35.2 
 
 
463 aa  244  1.9999999999999999e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.559432  normal 
 
 
-
 
NC_009338  Mflv_0640  ring hydroxylating dioxygenase, alpha subunit  35.2 
 
 
463 aa  244  1.9999999999999999e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.409215  normal 
 
 
-
 
NC_008703  Mkms_5639  ring hydroxylating dioxygenase, alpha subunit  35.2 
 
 
463 aa  244  1.9999999999999999e-63  Mycobacterium sp. KMS  Bacteria  normal  0.726822  normal 
 
 
-
 
NC_008705  Mkms_1690  ring hydroxylating dioxygenase, alpha subunit  34.97 
 
 
463 aa  243  6e-63  Mycobacterium sp. KMS  Bacteria  normal  normal  0.688738 
 
 
-
 
NC_008146  Mmcs_1666  ring hydroxylating dioxygenase, alpha subunit  34.97 
 
 
463 aa  243  6e-63  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1639  ring hydroxylating dioxygenase, alpha subunit  34.97 
 
 
463 aa  243  6e-63  Mycobacterium sp. JLS  Bacteria  normal  0.548645  normal 
 
 
-
 
NC_008726  Mvan_0525  ring hydroxylating dioxygenase, alpha subunit  34.97 
 
 
463 aa  243  7.999999999999999e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110269  normal 
 
 
-
 
NC_009338  Mflv_0595  ring hydroxylating dioxygenase, alpha subunit  34.63 
 
 
483 aa  241  2e-62  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal 
 
 
-
 
NC_009511  Swit_4280  Rieske (2Fe-2S) domain-containing protein  35.39 
 
 
423 aa  241  2e-62  Sphingomonas wittichii RW1  Bacteria  normal  0.369719  normal  0.899409 
 
 
-
 
NC_009077  Mjls_1595  ring hydroxylating dioxygenase, alpha subunit  34.63 
 
 
483 aa  240  4e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1647  ring hydroxylating dioxygenase, alpha subunit  34.63 
 
 
484 aa  240  4e-62  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1622  ring hydroxylating dioxygenase, alpha subunit  34.63 
 
 
484 aa  240  4e-62  Mycobacterium sp. MCS  Bacteria  normal  0.0299575  n/a   
 
 
-
 
NC_009338  Mflv_0537  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
466 aa  238  2e-61  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.689442  normal 
 
 
-
 
NC_009338  Mflv_0685  ring hydroxylating dioxygenase, alpha subunit  34.2 
 
 
484 aa  238  2e-61  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0546  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
466 aa  237  3e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1660  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
466 aa  236  6e-61  Mycobacterium sp. JLS  Bacteria  normal  0.188298  normal 
 
 
-
 
NC_008146  Mmcs_1689  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
466 aa  236  6e-61  Mycobacterium sp. MCS  Bacteria  normal  0.550846  n/a   
 
 
-
 
NC_008705  Mkms_1716  ring hydroxylating dioxygenase, alpha subunit  33.79 
 
 
466 aa  236  6e-61  Mycobacterium sp. KMS  Bacteria  normal  0.77849  normal 
 
 
-
 
NC_008726  Mvan_0463  ring hydroxylating dioxygenase, alpha subunit  34.39 
 
 
484 aa  235  1.0000000000000001e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.328369  normal 
 
 
-
 
NC_010338  Caul_1917  Rieske (2Fe-2S) domain-containing protein  32.86 
 
 
458 aa  234  2.0000000000000002e-60  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3092  ring hydroxylating dioxygenase, alpha subunit  32.63 
 
 
447 aa  231  2e-59  Acidovorax sp. JS42  Bacteria  normal  normal  0.955686 
 
 
-
 
NC_008538  Arth_4363  ring hydroxylating dioxygenase, alpha subunit  32.03 
 
 
487 aa  229  8e-59  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00000470921  n/a   
 
 
-
 
NC_008781  Pnap_2485  ring hydroxylating dioxygenase, alpha subunit  32.27 
 
 
447 aa  228  1e-58  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4220  ring hydroxylating dioxygenase, alpha subunit  31.87 
 
 
467 aa  223  6e-57  Mycobacterium sp. JLS  Bacteria  normal  normal  0.993865 
 
 
-
 
NC_007953  Bxe_C0586  Rieske-type ring hydroxylating dioxygenase alpha subunit  31.95 
 
 
468 aa  222  9.999999999999999e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.0659325  normal  0.154111 
 
 
-
 
NC_009077  Mjls_4195  Rieske (2Fe-2S) domain-containing protein  31.29 
 
 
468 aa  205  1e-51  Mycobacterium sp. JLS  Bacteria  normal  0.613542  normal 
 
 
-
 
NC_010515  Bcenmc03_3901  Rieske (2Fe-2S) domain-containing protein  30.5 
 
 
427 aa  188  2e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.812744 
 
 
-
 
NC_008543  Bcen2424_3619  Rieske (2Fe-2S) domain-containing protein  30.5 
 
 
427 aa  187  3e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0164916  normal 
 
 
-
 
NC_007511  Bcep18194_B2496  ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein  30.28 
 
 
427 aa  187  4e-46  Burkholderia sp. 383  Bacteria  normal  0.0124288  normal 
 
 
-
 
NC_010552  BamMC406_3525  Rieske (2Fe-2S) domain-containing protein  30.5 
 
 
427 aa  187  5e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0996141 
 
 
-
 
NC_010086  Bmul_5079  Rieske (2Fe-2S) domain-containing protein  30.28 
 
 
448 aa  186  6e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.253861 
 
 
-
 
NC_007650  BTH_II0327  benzoate 1,2-dioxygenase, alpha subunit  30.7 
 
 
427 aa  186  8e-46  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5355  Rieske (2Fe-2S) domain-containing protein  30.81 
 
 
427 aa  186  1.0000000000000001e-45  Burkholderia ambifaria AMMD  Bacteria  normal  0.569805  normal  0.872686 
 
 
-
 
NC_010338  Caul_1974  Rieske (2Fe-2S) domain-containing protein  28.57 
 
 
467 aa  184  2.0000000000000003e-45  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2105  putative (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region)  31.37 
 
 
427 aa  184  3e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2156  Rieske (2Fe-2S) domain protein  30.9 
 
 
427 aa  181  2.9999999999999997e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2209  Rieske (2Fe-2S) domain-containing protein  30.64 
 
 
427 aa  179  1e-43  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5382  Rieske (2Fe-2S) domain protein  30.43 
 
 
438 aa  176  9.999999999999999e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3192  putative ring hydroxylating dioxygenase, alpha subunit  30.65 
 
 
432 aa  172  7.999999999999999e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1531  Rieske (2Fe-2S) domain-containing protein  30.42 
 
 
433 aa  172  1e-41  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0185016 
 
 
-
 
NC_009511  Swit_4188  Rieske (2Fe-2S) domain-containing protein  28.97 
 
 
429 aa  171  3e-41  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0795618 
 
 
-
 
NC_009511  Swit_4174  Rieske (2Fe-2S) domain-containing protein  29.93 
 
 
440 aa  170  4e-41  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.000409814  normal  0.0305498 
 
 
-
 
NC_008699  Noca_0683  Rieske (2Fe-2S) domain-containing protein  30.7 
 
 
424 aa  171  4e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2368  benzoate 1,2-dioxygenase, large subunit  28.12 
 
 
449 aa  162  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4882  benzoate 1,2-dioxygenase subunit alpha  27.49 
 
 
464 aa  162  1e-38  Cupriavidus metallidurans CH34  Bacteria  normal  0.179471  normal  0.342768 
 
 
-
 
NC_008686  Pden_1177  Rieske (2Fe-2S) domain-containing protein  29.35 
 
 
452 aa  162  1e-38  Paracoccus denitrificans PD1222  Bacteria  normal  0.0599203  normal 
 
 
-
 
NC_010501  PputW619_2710  benzoate 1,2-dioxygenase, large subunit  27.98 
 
 
452 aa  161  2e-38  Pseudomonas putida W619  Bacteria  normal  normal  0.109533 
 
 
-
 
NC_009654  Mmwyl1_1826  Rieske (2Fe-2S) domain-containing protein  29.7 
 
 
429 aa  161  2e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.942727 
 
 
-
 
NC_002947  PP_3161  benzoate dioxygenase, alpha subunit  27.2 
 
 
452 aa  159  1e-37  Pseudomonas putida KT2440  Bacteria  normal  0.123489  normal  0.472768 
 
 
-
 
NC_007492  Pfl01_2968  benzoate 1,2-dioxygenase, alpha subunit  27.53 
 
 
452 aa  159  1e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2554  Rieske (2Fe-2S) domain-containing protein  27.2 
 
 
452 aa  159  1e-37  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2688  benzoate 1,2-dioxygenase, large subunit  26.94 
 
 
457 aa  158  2e-37  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
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