| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2112 |
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| Symbol | |
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| ID | 4689131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2251226 |
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| End bp | 2252617 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835123 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_982342 |
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| Protein GI | 121605013 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.206436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.278449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGA GACAAGAACG GAGACTATTT ATGAGCACCC CTACGCACAC TTCCAGCGTC
CAGGCGCGAC TCGATGGCAT GCTGGTCGAA GACAAAGAGC AGCACATCTA TCGCCTGAAC
CGCGCCGCTT TCACCGATCC CGAGCTGTTC GAACTGGAGG TCAAGCACCT GTTTGAAGGC
AACTGGATTT ACCTGGCCCA TGAAAGCCAG ATTCCCGACA ACAACGACTA TTTCACGACC
ACCATCGGCC GCCAGCCGAT CGTGATCACG CGCAACAAGC AGGGCCAGCT CAACGCCCTC
ATCAACGCCT GTTCGCATCG GGGCGCCACG CTGGCCCGCC GCAAAAAGGG CAACAAGGCC
AACTTCACCT GCACCTTCCA CGGCTGGACC TTCAACAACA GCGGCAAGCT GCTCAAGGTG
AAAGACGGCA ACGACGCGGG CTACCCCGAG TCCTTCAACA AGGAAGGCAG CCATGACCTG
AAGAAGATCG CGCGCTTTGA AAGCTACCGT GGTTTCCTGT TTGGCAGCCT GAACGACGAT
GTCAAGCCGC TGTCCGAATT CCTCGGCGAA GCCACCAAGA TCATCGACAT GATCGTTGAC
CAGTCGCCCG AGGGCCTGGA AGTGCTGCGC GGCGCATCGA CCTACACCTA CGATGGCAAC
TGGAAGCTGC AGACCGAAAA CGGCGCCGAC GGCTACCACG TCAGCTCGGT GCACTGGAAC
TACGCGGCCA CCACCAACCA CCGCAAGCAA AGCGAAGCCG GCGACAACGT CAAGGCGATG
GACGCGGGCA GCTGGGCCAA GCAGGGCGGC GGCTTCTATT CCTTCGAGCA CGGCCACATG
CTGCTGTGGA CCAAATGGGC CAACCCGGAA GACCGTCCGG CCCACGCCAT TCGCGACGAA
CTGGTTGAAA AATTCGGCCA GGCCCGCGCC GACTGGATGA TCAACCACTC GCGCAACCTG
TGCCTGTACC CCAACGTGTA CCTGATGGAC CAGTTCGGCT CGCAGATCCG CGTGCTGCGC
CCCATCTCGG TGGACAAGAC CGAAGTCACT ATCTACTGCA TCGCGCCCAA GGGCGAATCC
GCCGAGGCGC GCACCCGCCG CGTGCGCCAG TACGAAGACT TCTTCAACGC CACCGGCATG
GCCACGCCCG ACGATCTGGA AGAGTTCCGC GCCTGCCAGC AAGGCTACGC CGGCATCGAC
CTGCCCTGGA ACGACATGTG CCGTGGTTCG ACCCACTGGG TCGAAGGCGC CGATGCCGCA
GCCCAGGAAA TCGATTTGCA CCCCACGCTC AGCGGTGTCA AAACCGAGGA CGAAGGTCTG
TACACCGAAC AACACCGTTA CTGGCTCGAA GCCATGCAGC GCGCCGTTGC CGTTGATTCC
GAAAAAGCCT AA
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| Protein sequence | MQTRQERRLF MSTPTHTSSV QARLDGMLVE DKEQHIYRLN RAAFTDPELF ELEVKHLFEG
NWIYLAHESQ IPDNNDYFTT TIGRQPIVIT RNKQGQLNAL INACSHRGAT LARRKKGNKA
NFTCTFHGWT FNNSGKLLKV KDGNDAGYPE SFNKEGSHDL KKIARFESYR GFLFGSLNDD
VKPLSEFLGE ATKIIDMIVD QSPEGLEVLR GASTYTYDGN WKLQTENGAD GYHVSSVHWN
YAATTNHRKQ SEAGDNVKAM DAGSWAKQGG GFYSFEHGHM LLWTKWANPE DRPAHAIRDE
LVEKFGQARA DWMINHSRNL CLYPNVYLMD QFGSQIRVLR PISVDKTEVT IYCIAPKGES
AEARTRRVRQ YEDFFNATGM ATPDDLEEFR ACQQGYAGID LPWNDMCRGS THWVEGADAA
AQEIDLHPTL SGVKTEDEGL YTEQHRYWLE AMQRAVAVDS EKA
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