| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4152 |
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| Symbol | |
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| ID | 4685218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | - |
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| Start bp | 24982 |
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| End bp | 26352 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639826016 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_973181 |
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| Protein GI | 121582739 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.424226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.388878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA CAATAAAAGA AGTGCAGGAA TCCACTGTGA AGTGGACTCG CAATTGGACG
CCCGAGGCGA TCCGGGCGTT GGTCGATCAG GAAAAAGGGC TGCTTGACCC CCGCATCTAT
GCTGACCAAA GCCTTTACGA GCTGGAGCTT GAGCGGGTCT TTGGCCGCTC CTGGCTGTTG
CTAGGGCATG AGAGTCACAT TCCTAAAACC GGGGACTTCC TGACCACCTA CATGGGCGAA
GATCCGGTAG TCATGGTGCG GCAGAAAGAC CGTAGCATCA AGGTGTTTCT GAACCAGTGC
CGGCACCGCG GCATGCGCAT CTGCCGCTCG GACGCAGGTA ACGCCAAGGC GTTCACCTGC
AGCTACCATG GCTGGGCCTA CGACATTGCG GGTAACCTGG TGAACGTGCC GTTCGAGCAG
GAGGCGTTTT GCGACAAGAA GGAGGGAGAC TGCGGCTTTG ACAAGGCCGA CTGGGGTCCG
CTGCAAGCGC GCGTGGCCAC CTACAAGGGC CTGGTCTTCG CCAACTGGGA TGCCGAAGCG
CCCGATCTGG AAACCTACCT CGGTGACGCG CGTCCCTACA TGGATGTGAT GCTGGATCGT
ACTCCGGCTG GCACCGAGGC TATAGGCGGC ATGCAAAAGT GGGTGGTTCC GTGTAACTGG
AAGTACGCCG CCGAGCAGTT TTGCAGTGAC ATGTACCACG CCGGGACGAT GTCACACCTG
TCCGGGATTC TGGCGGGCAT GCCGCCAGAA ATGGATTTGT CGAATGCTCA GGTGCCGACC
AAGGGGAATC AGTTCCGAGC CCATTGGGGC GGGCATGGCT CGGGATGGTT TGTTGACGAG
CCAGGCATGC TCATGGCCGT GATGGGTCCC AAGGTCACCC AGTACTGGAC CGAAGGTCCC
GCCGCTGAAC TTGCAGAAAA ACGTCTGGCT CTGCCGGTTC GACGCATGTT TGGCCAGCAC
ATGAACATCT TCCCAACCTG TTCGTTCCTG CCCGCCATCA ACACCATCCG AAGCTGGCAC
CCTCGCGGCC CCAATGAAAT CGAGGTGTGG GCGTTCACCC TGGTCGATGC CGATGCACCC
GCAGAGATCA AGGAAGAATA TCGCCGGCAT AACATTCGCA CCTTCTCCGC TGGGGGTGTG
TTCGAGCAGG ACGACGGCGA GAATTGGGTC GAAATCCAGA AAGTGCTGCG CGGCCATAAG
GCCAAGAGCC AGCCGCTCAA TGCCCAGATG GGCCTGGGTC GGTCGCAGAC CGGCCATCCT
GATTTTCCCG GAAAGATTGG TTATGTCTAC GCCGAAGAGG CGGCGCGGGG CATGTACCAC
CACTGGGCCC GCATGATGTC GGAGCCAAGC TGGGCCACGC TAAAACCCTG A
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| Protein sequence | MSSTIKEVQE STVKWTRNWT PEAIRALVDQ EKGLLDPRIY ADQSLYELEL ERVFGRSWLL
LGHESHIPKT GDFLTTYMGE DPVVMVRQKD RSIKVFLNQC RHRGMRICRS DAGNAKAFTC
SYHGWAYDIA GNLVNVPFEQ EAFCDKKEGD CGFDKADWGP LQARVATYKG LVFANWDAEA
PDLETYLGDA RPYMDVMLDR TPAGTEAIGG MQKWVVPCNW KYAAEQFCSD MYHAGTMSHL
SGILAGMPPE MDLSNAQVPT KGNQFRAHWG GHGSGWFVDE PGMLMAVMGP KVTQYWTEGP
AAELAEKRLA LPVRRMFGQH MNIFPTCSFL PAINTIRSWH PRGPNEIEVW AFTLVDADAP
AEIKEEYRRH NIRTFSAGGV FEQDDGENWV EIQKVLRGHK AKSQPLNAQM GLGRSQTGHP
DFPGKIGYVY AEEAARGMYH HWARMMSEPS WATLKP
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