Gene Reut_B4403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4403 
Symbol 
ID3614324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1060637 
End bp1062034 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID637693834 
Productbenzoate 1,2-dioxygenase, alpha subunit 
Protein accessionYP_298599 
Protein GI73538232 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID[TIGR03229] benzoate 1,2-dioxygenase, large subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCCA TCCACGTGGA CCGGGGCACG GCCCCCGCTC GCCCGCGCCT CTCGCTCGAC 
CAGTTCCTCG TCGAAAACCA TGAGACCGGC GACTACCGCC TGCATCGCAG CGCGTTCACC
GACGAAGCAC TGTTCGAACT CGAGATGAAG CACATCTTCG AGGGCAACTG GATCTACCTG
GCCCACGAAA GCCAGATCCC GAACAACAAC GACTACTACA CCACGCACAT GGGCCGCCAG
CCCGTGTTCA TCGCCCGCAA CCGCCAGGGC GAACTGAATG CCTTCATCAA CGCATGCACC
CACCGCGGCG CCATGCTGTG CCGGCACAAG CGCGGCAACA AGGCCACCTA CACCTGCCCG
TTCCACGGCT GGACCTTCAA CAACAGCGGC AAGCTGCTCA AGGTGAAGGA CCCCGAAGGC
GCCGGCTACC CCGAGTGCTT CAACAAGGAA GGCTCGCACG ACCTGAAGAA GGTGGCGCGC
TTCGAGAACT ACCGCGGCTT CCTGTTCGGC AGCCTCAATG ACGACGTGCT GCCGCTCAAG
GATTTCCTCG GCGATGCGGC ACGCATCATC GACATGATTG CCGACCAGTC GCCCGATGGC
CTGGAAGTGC TGCGCGGCTC GTCCACCTAC ACCTACGAAG GCAACTGGAA GCTGCAGGCC
GAAAACGGCG CCGACGGCTA CCACGTATCC GCCGTGCACT GGAACTACGC GGCCACCACC
AACCACCGCA AGCAGCAGAA CGAGCGCGAA GACAAGATCC GCGCGATGGA TGCCGGCAAG
TGGGGCCAGC AAGGCGGCGG CTTCTACGCG TTCGATCATG GCCATATGCT GCTGTGGACG
CGCTGGGCCA ACCCGGAAGA CCGGCCCAAC TTCGCGCGCC GCGCTGAATT CGCCGAGCGC
TGCGGAGAGG AAACCGCGGA CTGGATGATC CAGAACTCGC GCAACCTGTG CCTGTACCCG
AACGTGTACC TGATGGACCA GTTCGGCTCG CAGATCCGCC TGCTGCGCCC GCTGTCGGTC
GACAAGACCG AAGTCACGAT CTACTGCATC GCGCCGAAGG GAGAACCCGA CGACGCCCGT
GCGCGCCGCA TCCGCCAGTA CGAAGATTTC TTCAACGTGA GCGGCATGGC CACGCCGGAC
GATCTCGAGG AATTCCGCGC CTGTCAGCAG GGCTACAACG GCAGCGCGCT GGCCTGGAAC
GACATGTGCC GCGGCTCCAA GCACTGGATC GAAGGCCCCG ATGAAGCGGC GCAACGCATC
GGCCTGAACC CCGTCATGAG CGGCGTGCGG ACCGAGGATG AAGGGCTCTA CACCGTGCAA
CACCGCTACT GGCTCGACGT CATGAAGAAG GCCATGGCCG AGCAAGACAC GGAAGACTGC
AACGGGAGCG CCGCATGA
 
Protein sequence
MIPIHVDRGT APARPRLSLD QFLVENHETG DYRLHRSAFT DEALFELEMK HIFEGNWIYL 
AHESQIPNNN DYYTTHMGRQ PVFIARNRQG ELNAFINACT HRGAMLCRHK RGNKATYTCP
FHGWTFNNSG KLLKVKDPEG AGYPECFNKE GSHDLKKVAR FENYRGFLFG SLNDDVLPLK
DFLGDAARII DMIADQSPDG LEVLRGSSTY TYEGNWKLQA ENGADGYHVS AVHWNYAATT
NHRKQQNERE DKIRAMDAGK WGQQGGGFYA FDHGHMLLWT RWANPEDRPN FARRAEFAER
CGEETADWMI QNSRNLCLYP NVYLMDQFGS QIRLLRPLSV DKTEVTIYCI APKGEPDDAR
ARRIRQYEDF FNVSGMATPD DLEEFRACQQ GYNGSALAWN DMCRGSKHWI EGPDEAAQRI
GLNPVMSGVR TEDEGLYTVQ HRYWLDVMKK AMAEQDTEDC NGSAA