| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1324 |
|---|
| Symbol | |
|---|
| ID | 6134621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 1457416 |
|---|
| End bp | 1458744 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641641603 |
|---|
| Product | benzoate 1,2-dioxygenase, large subunit |
|---|
| Protein accession | YP_001768274 |
|---|
| Protein GI | 170739619 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0648485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGAAG ATCTGCATCA GATTGTCGAG ACCGCGGTTG AGGATAATCC CGAGACGGGC
ACCTATCGCT GCCGGCGCGA CATCTTCACG GATCCCGACA TCTTCGAGTT GGAGATGCGG
CATATATTCG AGGGGAACTG GATCTACATG GCCCACGAGA GCCAGATCCC GAACCCGAAC
GATTATTTCA CGACCTATAT GGGCCGCCAG CCGGTGGTCA TCACCCGCAA CCGCAAGGGC
GAGCTCCAGG CCTTCGTCAA CGCGTGCAGC CATCGCGGCG CGATGATCTG CCGGCACAGG
CGCGGCAACA AGGCGACCTT CACCTGCCCG TTCCACGGCT GGACCTTCAG CAACGGCGGC
AGGCTGCTCA AGGTCAAGGA CCCGGAGGGC GCGGGCTATC CCGACAGCTT CAACCGCGAC
GGCTCGCACG ACCTGACGCC CGTGGCCCGG TTCGAGAGCT ACCGCGGTTT CCTGTTCGGC
AGCCTCAACC CGGACGTGAA GCCGCTCACC GAGCACCTCG GCGAGGCGAC GAGGATCATC
GACATGATCG TCGACCAGTC GCCGGACGGG CTCGAAGTGC TGCGCGGCGC CTCGACCTAC
GTCTTCGACG GCAACTGGAA GCTCCAGACC GAGAACGGCG CCGACGGCTA CCACGTCAGC
GCGACGCACT GGAACTACGC CGCCACGACG AGCCGCCGCA AGGAGACCCA CGTCGTCGAC
AAGACCCGCG CGATGGATGC GGGCGGCTGG GCGAAGCAGG GCGGCGGCTT CTACTCCTTC
GCGCACGGGC ACCTGCTGCT CTGGACCACC TGGGCCAACC CGGAGGACCG CCCGAACTGG
GACCGGCGCG AGGAGCTGGC GGCGGCTCAC GGGCAGGCGA TGGCGGACTG GATGATCAGC
CGCTCGCGCA ACCTCTGCCT CTACCCGAAC GTCTACCTGA TGGACCAGTT CTCGTCGCAG
ATCCGCACCT ACCGGCCGAT CGCGGTCGAT AAGACCGAGG TGACGATCTA CTGCATCGCC
CCGAAGGGCG AGGCCCCCGA GGCGCGGGCC CGGCGCATCC GCCAGTACGA GGATTTCTTC
AACGCGAGCG GCATGGCGAC CCCGGACGAC CTCGAGGAGT TCCGGGCCTG CCAGCTCGGC
TACCAGGGCC GGGCGGCGCG CTGGAACGAC CTCTGCCGGG GCGCCACCCA CTGGATCGAG
GGCGCCGACG AGGGCGCGCG GGCGATCGGC CTCGAGCCGC TGCTCAGCGG CGTCAGGACC
GAGGACGAGG GCCTGTTCGC GATCCAGCAC CGCTACTGGA TGGAGACGAT GCGCCGGCAC
CTGCCGTAG
|
|---|
| Protein sequence | MLEDLHQIVE TAVEDNPETG TYRCRRDIFT DPDIFELEMR HIFEGNWIYM AHESQIPNPN
DYFTTYMGRQ PVVITRNRKG ELQAFVNACS HRGAMICRHR RGNKATFTCP FHGWTFSNGG
RLLKVKDPEG AGYPDSFNRD GSHDLTPVAR FESYRGFLFG SLNPDVKPLT EHLGEATRII
DMIVDQSPDG LEVLRGASTY VFDGNWKLQT ENGADGYHVS ATHWNYAATT SRRKETHVVD
KTRAMDAGGW AKQGGGFYSF AHGHLLLWTT WANPEDRPNW DRREELAAAH GQAMADWMIS
RSRNLCLYPN VYLMDQFSSQ IRTYRPIAVD KTEVTIYCIA PKGEAPEARA RRIRQYEDFF
NASGMATPDD LEEFRACQLG YQGRAARWND LCRGATHWIE GADEGARAIG LEPLLSGVRT
EDEGLFAIQH RYWMETMRRH LP
|
|---|
| |