| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1531 |
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| Symbol | |
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| ID | 5197341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1700856 |
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| End bp | 1702157 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581079 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262032 |
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| Protein GI | 148554450 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0185016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGT TCGACTTCGT CGATGGTGAG GAACTGGGCC GGCTGGTCCG GCCCGACCGC
ATCCATGCCC GGGTCTACAC CGATCCCGCC CTGTTCGAAC TGGAGCAGCA GAACCTGTTC
GGACGGGCGT GGATGATCGT CGGGCATGAG AGTCAGGTGC CGACGCCGGG TGCGTTCGTC
ACGGCCAATC TCGGTACGCT GCCGGTGATC GTCACCCGAT CGTCCGACGA CGCCATCCAC
GTTCTAGAGA ATCGCTGCCC GCACAAGGGC GCGGCGATCT GCACCGTGCC TTCGGGAAAG
CTCAAGCGGC TGCAATGCCC CTATCATGGC TGGGCCTTCC GCCTCGACGG CAGCCTTCTC
GCGCTGCCCG AGAGGCAGGA ATATGACGCC GGCATCGACA CGGCTGGCCT CGGCCTGACG
CCGGTCGCGA AGGTCGAGCT CTATCGCGGC TTCATCTTCG CCAACACCGA TCCGAACGCC
CCGCCGCTCG CCACCTTCCT GGGGCCGATG GCCGACACGA TCGACAATCT CGTCGATCGC
GCGCCAGAGG GTCGAGTCGA AATCTACGGC TCACCGGTCC GCTATGTCTA TCGCGGCAAC
TGGAAGTTCG TGGTGGAGAA TTTCAACGAC GCGCATCACG CGGCGATGAC CCACGCCTCG
GCGGTGAGCG CCGTGCGCAG CATCGAGGCC AGGGTGGGCA GCGACAAGCT GTCCGAAATG
CTCCGCATCG CCGCCGCCAA CGGCAAGCCG ATGAGCGTCT GGCAAAGCTC GCCCCTCTAC
ACCGTCGACT ATGGCCACAG CTATTTCGGG ACGCATTTCG CCATTCCCTA TGAAGACGAT
GTGATGGCCA AATATTTTCC GATGCTGGTG GACGCCCATG GCGAGGCGAA AGCGCGGGAC
GTGCTCAATT TCGACCAGCA TCTGATGATC CTCTATCCGA GTTCGTCCTG GCAGACGCGC
TATCAGTCGC TCAGGGTCGT GCGGCCGCTC GCCGTCGATC GGACCGAGGT GATCGGCTAT
GTCTTCAGGC TGGTGGGCGC GCCCGAGGAG ACGCTGGACG AGGCGGTGCG GCTGAGCAGC
GGCTTCACCG GCTTCAACAT CGTCACCCAG GACGACATCG AAGTGTTCGA AAGCTGCCAG
GAGGCGATGA CCGCGGGCCG TATCGAATGG AATTTCATCG GCCGCGGCGC CGCCGATACG
GGCGTGCCGC AGGCGCGGAA GACACGCCAT GTCGGCACCA GCGAAGCCTA TATCCGCGGG
CAGATGGCGG CCTGGGCCGG CTTCATGGGA GGGATGATCT GA
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| Protein sequence | MTAFDFVDGE ELGRLVRPDR IHARVYTDPA LFELEQQNLF GRAWMIVGHE SQVPTPGAFV
TANLGTLPVI VTRSSDDAIH VLENRCPHKG AAICTVPSGK LKRLQCPYHG WAFRLDGSLL
ALPERQEYDA GIDTAGLGLT PVAKVELYRG FIFANTDPNA PPLATFLGPM ADTIDNLVDR
APEGRVEIYG SPVRYVYRGN WKFVVENFND AHHAAMTHAS AVSAVRSIEA RVGSDKLSEM
LRIAAANGKP MSVWQSSPLY TVDYGHSYFG THFAIPYEDD VMAKYFPMLV DAHGEAKARD
VLNFDQHLMI LYPSSSWQTR YQSLRVVRPL AVDRTEVIGY VFRLVGAPEE TLDEAVRLSS
GFTGFNIVTQ DDIEVFESCQ EAMTAGRIEW NFIGRGAADT GVPQARKTRH VGTSEAYIRG
QMAAWAGFMG GMI
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