| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6299 |
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| Symbol | |
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| ID | 6182740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 890361 |
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| End bp | 891719 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689426 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001816285 |
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| Protein GI | 172065573 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00410726 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCCA CGATCGACCC CACCACCGAA CTGGACCACC TGCTCGCCAC CGCCGTGCAG
GACGACAAGG AAGCCGGCGT GTTCCGCTGC CGCCGCGACA TCTTCACGAA CGAGGCGCTG
TACGAGCTCG AGATGAAGCA CATCTTCGAG CGCAACTGGG TGTACCTCGC GCACGAGAGC
CAGATCCCGA ACAACAACGA TTACTACACG ACGTGGATCG GCCGCCAGCC GGTCGTCATC
ACGCGCGACA AGGCTGGCGA GCTGCACGCG GTGATCAATG CGTGCGCGCA CAAGGGCGCG
ATGCTGTGCC GCCGCAAGCA CGGCAACAAG GGCAGCTTCA CGTGCCCGTT CCACGGCTGG
ACCTTCTCGA ACACCGGCAA GCTGCTGAAG GTGAAGGACG AGAAGACGAC CGAGTATCCG
GTGCAGTTCA ATACGCACGG CTCGCACGAC CTGAAGAAGG TCGCGCGCTT CCAGAGCTAT
CGCGGCTTCC TGTTCGGCAG CCTCAGCGAC GACGTGCTGC CGCTCGAGGA CTACCTCGGC
GAGGCGCGCG TGATCATCGA CCAGATCGTC GACCAGGCGC CGAACGGGCT CGAGGTGCTG
CGCGGCAACT CGTCCTACAT CTACGAAGGC AACTGGAAGA TGCAGATGGA GAACGGCTGC
GACGGCTATC ACGTGAGCAC CGTGCACTGG AACTACGCGG CGACGATGGG CCGCCGCAAG
GAAGACGGCA CCAAGGCCGT CGATGCGAAC AGCTGGAGCA AGTCGGTCGC GGGCGTGTAC
GGCTTCGACA ACGGCCACAT CCTGCTGTGG ACCAAGACGA TGAACCCGGA AGTGCGGCCC
GTGTACCGGC ACCGCGACGA GATCGAGGCG CGCGTGGGCG CGGCGCAGGC CGACTTCATC
GTGAACCAGA CGCGCAATCT GTGCGTGTAC CCGAACGTGT TCCTGATGGA CCAGTTCAGC
ACGCAGATCC GCGTGGTGCG TCCGCTCGGC GTCGACAAGA CCGAAGTCAG CATCTTCTGC
TTCGCGCCGA AGGGCGAGAG CGAAGCCGAC CGCACGACCC GAATCCGACA GTACGAGGAT
TTCTTCAACG TGACCGGAAT GGGCACGGCC GACGATCTCG AGGAATTCCG CGCATGCCAG
GCCGGCTACG CGGGCATCAC GGCGATGTGG AACGACCTGT CGCGCGGCGC GCCGCTGTGG
ATCCACGGGC CGGACGAGAA CGCGAAGAAG ATGGGGCTGA ACCCGCGCAT TTCGGGCGAG
CGCAGCGAGG ACGAAGGGCT GTTCGTGTGC CAGCACGAAC ACTGGGTGCA CGTGATGCGC
GATGCACTGA AGAAGGAACG CGCGGAGGTG GCGGCATGA
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| Protein sequence | MSATIDPTTE LDHLLATAVQ DDKEAGVFRC RRDIFTNEAL YELEMKHIFE RNWVYLAHES
QIPNNNDYYT TWIGRQPVVI TRDKAGELHA VINACAHKGA MLCRRKHGNK GSFTCPFHGW
TFSNTGKLLK VKDEKTTEYP VQFNTHGSHD LKKVARFQSY RGFLFGSLSD DVLPLEDYLG
EARVIIDQIV DQAPNGLEVL RGNSSYIYEG NWKMQMENGC DGYHVSTVHW NYAATMGRRK
EDGTKAVDAN SWSKSVAGVY GFDNGHILLW TKTMNPEVRP VYRHRDEIEA RVGAAQADFI
VNQTRNLCVY PNVFLMDQFS TQIRVVRPLG VDKTEVSIFC FAPKGESEAD RTTRIRQYED
FFNVTGMGTA DDLEEFRACQ AGYAGITAMW NDLSRGAPLW IHGPDENAKK MGLNPRISGE
RSEDEGLFVC QHEHWVHVMR DALKKERAEV AA
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