Gene Mflv_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_0558 
Symbol 
ID4971894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp586512 
End bp587903 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID640454761 
Productring hydroxylating dioxygenase, alpha subunit 
Protein accessionYP_001131838 
Protein GI145221160 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.559432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTC ACGTTCTAGG GGCACAAATC GATAGGAAGG TGCGCCCGGT GGATTCGATG 
GCGCCTGATG CGACGACAAT GCGAACCTTA GAGAATGCGC GCGGCTCCAT CCTAAAGGGT
CGCCTCCCTG CGTCTCTCAT CGCTAATGCA GCGCTTTACG AGCTTGAATT GAAGCGAGTA
TTTGGTAGGA CCTGGCAGTT TCTCTGCCAC GAAGACGAGA TCCCCAATGC GGGTGACTAT
GTAGTGCGCT ACATCGCTGA TAACTCAATT ATTGTCGCGC GGCAGCAGGA TATGACGATT
CGGGCGATGT CGAACTCGTG TCGGCACCGC GGCACGCTGC TTTGCCGAAC CGAGTCTGGG
AATGAGTCGG CGTTCCAGTG TCCGTACCAC GGTTGGACCT ATCGAAACAA CGGTGATCTC
ATCGCGATAC CTGCGCAGCA GGCAGTGTAC GGTGCTGCGT TCGACAAGAG TCGGCTAGGG
TTGCGCGCTC TGCCGATGCT GGACTCGTAC GCGGGCCTTG TCTTCGGGTG TGTGTCGGAT
GAGGCGCCGG GACTGGATGA GTACCTCGGG GACATGCGCT GGTATCTCGA CTTGATGATG
AAGAAGAGCC CGGCCGGCCT TGAGGCGTGG GGTGCCCCGC AGCGTTGGGT GATTGACGCG
AACTGGAAGA CCGGCGCCGA TAACTTTGTT GGGGACGGCT ATCACACGGT CATGACGCAC
CGTTCGATGT GTGAGCTGGG GTTGTTACCG CCCGATAATG TGGCCGTTTC GCCGGCCCAC
GTCAGCCTAT CGGGCGGGCA CGGGGCGGGC GTTCTAGGCG CACCACCCGG CATACCCGCA
CCGCCGTACA TGGGCTATCC GGAGGAAGTC GTCTCCGGTC TCAGCGAGGG TTACGGCGAT
GACGTCCATG GCGAGTTGCT GAAACGGACG ATGTTCATTC ATGGCAATGT GTTCCCGAAC
TTGTCCTTCT TGAACGCCTT CATCGCCAAG GACGGGGAGT CTATGCCGGT GCCCATTCTG
ACCTTGCGGC AATGGCGTCC CTTGGACGCA GCGCGTATGG AGGTGTGGTC GTGGTTCTTC
GTGGAGCGCA ACGCGCCCGA AGAGTTCAAG CAGCAGTCGT TTGAGACTTA TGTTCGGACG
TTCGGGGTCG GGGGTGTCTT CGAGCAGGAT GACGCCGAGA TATTCCAGGC TATTACCAAG
GGAACACGCG GCGAGTTGGC TGGTGGTGTG GAGCTGAACC TGGAGATGGG ACTGGACAAT
CTGGCTCCTG ATCCAACGTG GCTGGGCCCG GGACGACCGT TGGCCAGTGG CTACGCCGAA
CAGAATCAGC GCGAGTACTG GAAGCAGTAC TTCGACTATC TGGCCACACC GAGAAGGGAT
GAGAACGTAT GA
 
Protein sequence
MSAHVLGAQI DRKVRPVDSM APDATTMRTL ENARGSILKG RLPASLIANA ALYELELKRV 
FGRTWQFLCH EDEIPNAGDY VVRYIADNSI IVARQQDMTI RAMSNSCRHR GTLLCRTESG
NESAFQCPYH GWTYRNNGDL IAIPAQQAVY GAAFDKSRLG LRALPMLDSY AGLVFGCVSD
EAPGLDEYLG DMRWYLDLMM KKSPAGLEAW GAPQRWVIDA NWKTGADNFV GDGYHTVMTH
RSMCELGLLP PDNVAVSPAH VSLSGGHGAG VLGAPPGIPA PPYMGYPEEV VSGLSEGYGD
DVHGELLKRT MFIHGNVFPN LSFLNAFIAK DGESMPVPIL TLRQWRPLDA ARMEVWSWFF
VERNAPEEFK QQSFETYVRT FGVGGVFEQD DAEIFQAITK GTRGELAGGV ELNLEMGLDN
LAPDPTWLGP GRPLASGYAE QNQREYWKQY FDYLATPRRD ENV