| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1428 |
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| Symbol | |
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| ID | 8019073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1510199 |
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| End bp | 1511557 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644830207 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002981388 |
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| Protein GI | 241663028 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0496525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.359815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT TGATCGACAA AGCCAGCGAA CTGGACCAAC TGCTGTCAAC CGCCGTGGTG
GATGACAAAG AGGCCGGGAT TTTCCGCTGC CGCCGCGACA TCTTCACCCA CCCCGATCTG
TTCGAGTTGG AGATGAAGCA CATCTTCGAG AGCAACTGGG TGTATCTGGC GCACGAGAGC
CAGATTCCAA ACATCAACGA CTACTACACG ACGTGGATTG GCCGCCAGCC GATCGTCATC
ACGCGCGACA AGACGGGTGA GCTGAACGCG GTTATCAACG CCTGCGCACA CAAGGGCGCG
ATGCTCTGCC GTCGCAAGCA CGGCAACAAG GGCAGCTTCA CGTGCCCGTT CCACGGCTGG
ACGTTCTCCA ACACCGGCAA GCTGCTGAAA GTGAAGGACG AAAAGACCAC CGAGTACCCA
GTGCAATTCA ACACGCATGG CTCGCACGAT CTCAAGAAGG TTGCGCGGTT CGAGAGCTAT
CGCGGCTTCC TGTTCGGCAG CCTCAACGCC GATGTGCAGC CGCTTGAGGC GTACCTGGGC
GAAGCGCGCG TGATCATCGA CCAGATCGTC GATCAGGCGC CCGAAGGCCT GGAAGTGCTG
CGCGGCAACT CCACGTACGT CTATGACGGC AACTGGAAGA TGCAGATGGA GAACGGCTGC
GACGGCTACC ACGTCAGCAC CGTGCACTGG AACTACGCCG CAACGATGGG GCGACGCAAG
GAAGGCGGCA CGCAGGCAGT CGACGCGAAC AGCTGGAGCA AGTCGGTGGC GGGCGTCTAT
GGGTTCGAGC ACGGCCACAT CCTGCTGTGG ACGCAGACGA TGAACCCGGA AGTGCGGCCC
GTCTATGCGC ACCGCGAGGA AATCAAGGCG CGCGTGGGTG AAACCCAGAC CGATTTCATC
GTCAACCAGA CGCGCAACCT GTGCCTGTAT CCGAACGTGT TCCTGATGGA TCAGTTCAGC
ACGCAGATTC GCGTGGTGCG CCCGATCAAT GTCGACAAGA CCGAGGTCTC GATCTTCTGT
TTCGCGCCGA AGGGCGAGAG CGCAACGGAC CGCGCAACGC GCATCCGCCA GTACGAGGAT
TTCTTCAACG TCACCGGCAT GGGCACCGCC GACGACCTCG AAGAGTTCCG CGCCTGCCAG
AACGGCTATG CCGGCACCAC TGCACTGTGG AACGACCTGT CGCGCGGCGC ACCGCTGTGG
GTGCACGGCC CCGACGAGAA CGCAACGAAG ATGGGATTGA AGCCCCTCAT CTCAGGCGAG
CGCAGCGAAG ACGAAGGCCT GTTCGTCTGT CAGCACGAAT ACTGGGTGCG CGTCATGCGT
GAGGCGCTCA AGCAGGAATG CGAAGGAGTG CCGGCATGA
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| Protein sequence | MSALIDKASE LDQLLSTAVV DDKEAGIFRC RRDIFTHPDL FELEMKHIFE SNWVYLAHES
QIPNINDYYT TWIGRQPIVI TRDKTGELNA VINACAHKGA MLCRRKHGNK GSFTCPFHGW
TFSNTGKLLK VKDEKTTEYP VQFNTHGSHD LKKVARFESY RGFLFGSLNA DVQPLEAYLG
EARVIIDQIV DQAPEGLEVL RGNSTYVYDG NWKMQMENGC DGYHVSTVHW NYAATMGRRK
EGGTQAVDAN SWSKSVAGVY GFEHGHILLW TQTMNPEVRP VYAHREEIKA RVGETQTDFI
VNQTRNLCLY PNVFLMDQFS TQIRVVRPIN VDKTEVSIFC FAPKGESATD RATRIRQYED
FFNVTGMGTA DDLEEFRACQ NGYAGTTALW NDLSRGAPLW VHGPDENATK MGLKPLISGE
RSEDEGLFVC QHEYWVRVMR EALKQECEGV PA
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