| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1297 |
|---|
| Symbol | |
|---|
| ID | 8752961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1361648 |
|---|
| End bp | 1363024 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | benzoate 1,2-dioxygenase, large subunit |
|---|
| Protein accession | YP_003408406 |
|---|
| Protein GI | 284989852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCG ATGCCACCCA GCTGCACGAC GTCCTCACCG ATGCCGTGAT CGACGACCCC
GAGGCCGGGG TCTACCGCGC CAACCGTCGG ATCTTCACCG ACGAGGAGGT CTTCGAGCTG
GAGATGACCC ACATCTTCGA GGGGAACTGG GTCTACCTCG CGCACGAGAG CCAGGTCCCG
GACCCCGGGG ACTACTTCAC CACCTACATC GGCCGCCAGC CCGTCGTCAT CACCCGCGAC
AAGCACGGCG AGCTGCACTG CCTGATCAAC GCCTGCGCAC ACCGCGGGGC GATGCTCTGC
CGCCGCAAGA CGGACAACCG CATGACGCTG ACCTGCCCGT TCCACGGCTG GACGTTCCGC
AACGACGGTG CCCTGCTGAA GGTCAAGGAC CCCGACGGCG CCGGCTACCC GGGCAGTTTC
AACAAGGACG GTTCGCACGA CCTGGTCAAG GTGGCGCGGT TCGACAGCTA CCGCGGGTTC
CTCTTCGGCA GCGTCAACCC GGACGTGAGC ACGCTCGCCG AGCACCTCGG TGACACCACC
AAGGTCATCG ACATGCTCGT CGACCAGTCG CCGGAGGGGC TGGAGGTGCT GCGCGGCTCC
TCGACCTACA CCTACGACGG CAACTGGAAG GTCCAGGCGG AGAACGGCGC CGACGGCTAC
CACGTCAGCG CGACCCACTG GAACTACGCG GCCACGACCT CGCGGCGCAG CACGGGCGAG
TCGAAGAACA CGACCAAGGC CCTGGACGCC GGCGGCTGGG GCAAGTCCGG TGGCGGCTAC
TGGTCCTACC CCAACGGGCA CCTGTGCCTG TGGACCTGGG CGGCCAACCC GGAGGACCGC
CCGCTGTGGG ACCGCATGGA CGAGCTCAAG GCGCAGTTCG GCGAGGCCAA GGGCGAGTTC
ATGATCAAGG GCTCCCGCAA CCTGTGCCTC TACCCGAACG TCTACCTGAT GGACCAGTTC
AGCACCCAGA TCCGGCACTT CCGGCCGATC TCGCCCGAGC AGACCGAGGT CACCATCTAC
TGCATCGCCC CCAAGGGCGA GAGCGCCGAG GCCCGCGAGC ACCGGATCCG CCAGTACGAG
GACTTCTTCA ACGCCTCGGG CATGGCCACG CCGGACGACC TGGAGGAGTT CCGCTCCTGC
CAGCTCACCT TCCGGGCGAC CGCCGCGCCC TGGAACGACA TGAGCCGCGG TGCCGAGCAC
TGGCTGAACG GGCCGGACCC GGTCGCCGAG GCCCTCGGCA TGGACGGCGT CATCTCCGCG
GGGCAGCGCA ACGAGGACGA GGGGCTGTAC CCGATCCAGC ACGGCTACTG GCTGCAGACC
ATGCGCGCCG CACTCGAGAA GCGGTCCGGC GTGGCCACCG CGACTCCGGA GGGCTGA
|
|---|
| Protein sequence | MTVDATQLHD VLTDAVIDDP EAGVYRANRR IFTDEEVFEL EMTHIFEGNW VYLAHESQVP
DPGDYFTTYI GRQPVVITRD KHGELHCLIN ACAHRGAMLC RRKTDNRMTL TCPFHGWTFR
NDGALLKVKD PDGAGYPGSF NKDGSHDLVK VARFDSYRGF LFGSVNPDVS TLAEHLGDTT
KVIDMLVDQS PEGLEVLRGS STYTYDGNWK VQAENGADGY HVSATHWNYA ATTSRRSTGE
SKNTTKALDA GGWGKSGGGY WSYPNGHLCL WTWAANPEDR PLWDRMDELK AQFGEAKGEF
MIKGSRNLCL YPNVYLMDQF STQIRHFRPI SPEQTEVTIY CIAPKGESAE AREHRIRQYE
DFFNASGMAT PDDLEEFRSC QLTFRATAAP WNDMSRGAEH WLNGPDPVAE ALGMDGVISA
GQRNEDEGLY PIQHGYWLQT MRAALEKRSG VATATPEG
|
|---|
| |