| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1373 |
|---|
| Symbol | |
|---|
| ID | 4110210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1490156 |
|---|
| End bp | 1491544 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638030494 |
|---|
| Product | Rieske (2Fe-2S) region |
|---|
| Protein accession | YP_638541 |
|---|
| Protein GI | 108798344 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAC CGATGAGCGC ACCGACAGCC GAACCCCGCA GTCACCTCGA GACCGTCCTC
GCCGATGCGG TGATCGACGA CCACGCGGCC GGGATCTACC GCACCAACCG GCGGATCTTC
ACCGACGAGG ACATCTTCGA GCTCGAGATG GAGCACATCT TCGAGGGCAA CTGGATCTAC
CTCGCCCACG AAAGTCAGGT CGCCGAACCG GGCGACTACT TCACCACGTA CATGGGCCGC
CAGCCCGTCG TCATCACCCG CGACAAGAAC GGGGGCCTCA ACTGCCTGGT CAATGCCTGT
GCACACCGAG GGGCGATGGT GTGCCGACGC AAGACCGACA ACCGGATGAC GCTCACCTGT
CCCTTTCACG GGTGGACCTT CCGCAACGAC GGGACCTTGC TCAAGGTCAA GGATCCCGAG
GGGGCCGGCT ACCCGGCGAC GTTCGACGTC GACGGCTCGC ACAACATGAC CAAGGTGGCC
CGGTTCGACA GCTACCGCGG ATTCCTGTTC GGCAGCCTCA ACCCGGACGT CGTCCCCCTC
CTCGAGCACC TCGGTGACAC CACCAAGGTC ATCGACATGC TCGTCGACCA GTCCCCCGAC
GGCCTGGAGG TGTTGCGCGG ATCGTCGACC TACACCTACG ACGGCAACTG GAAAGTGCAG
GCGGAGAACG GCGCCGACGG TTATCACGTC ACCGCGACGC ACTGGAACTA CGCCGCGACC
ACCTCACGGC GCAACACCGG CGAGTCCGCC AACGACACCA AGGCGCTCGA CGCCGGCAGC
TGGGGGAAGT CCGGCGGCGG CTACTGGTCC TACCCGAACG GCCACCTCTG CCTGTGGACG
TGGGCGGCCA ACCCCGAGGA CCGCCCGCTG TGGGACCGGC TCGACGACCT CAAGAGCGTC
CACGGCGCGG CCAAGGGCGA GTTCATGGTG AAGGGTTCAC GCAACCTGTG CCTGTACCCG
AATGTGTATC TGATGGACCA ATTCTCGACG CAGATCCGCC ACTTCCGGCC GATCGCGCCG
GACAAGACCG AGGTCACCAT CTACTGCATC GCCCCCAAGG GTGAGAACGC CGATGCCCGC
GCCAGGCGCA TCCGCCAGTA CGAGGACTTC TTCAACGCCT CGGGCATGGC CACCCCGGAC
GACCTCGAGG AGTTCCGCTC CTGCCAGCTG ACCTACCAGG CCACCGCCGC CCCGTGGAAC
GACATGAGCC GCGGTGCGCA GCACTGGCTG TCCGGACCCG ACGAGGTCGC CGAATCGCTG
GGGATGCACG GCGTCATCTC CGCGGGCGTG CGCAACGAGG ACGAGGGCCT CTACCCCGTC
CAGCACGGCT ACTGGCTGCA GACCATGCGT GCGGCGCTGG CCCAAAACGA GACCGGATCG
GAGAAGTGA
|
|---|
| Protein sequence | MEAPMSAPTA EPRSHLETVL ADAVIDDHAA GIYRTNRRIF TDEDIFELEM EHIFEGNWIY
LAHESQVAEP GDYFTTYMGR QPVVITRDKN GGLNCLVNAC AHRGAMVCRR KTDNRMTLTC
PFHGWTFRND GTLLKVKDPE GAGYPATFDV DGSHNMTKVA RFDSYRGFLF GSLNPDVVPL
LEHLGDTTKV IDMLVDQSPD GLEVLRGSST YTYDGNWKVQ AENGADGYHV TATHWNYAAT
TSRRNTGESA NDTKALDAGS WGKSGGGYWS YPNGHLCLWT WAANPEDRPL WDRLDDLKSV
HGAAKGEFMV KGSRNLCLYP NVYLMDQFST QIRHFRPIAP DKTEVTIYCI APKGENADAR
ARRIRQYEDF FNASGMATPD DLEEFRSCQL TYQATAAPWN DMSRGAQHWL SGPDEVAESL
GMHGVISAGV RNEDEGLYPV QHGYWLQTMR AALAQNETGS EK
|
|---|
| |