| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2898 |
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| Symbol | |
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| ID | 5191070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3286623 |
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| End bp | 3287927 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640587346 |
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| Product | ring hydroxylating dioxygenase, alpha subunit |
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| Protein accession | YP_001268212 |
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| Protein GI | 148548110 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.502891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.614972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG ACAAGAATCT GGTAGAGATC GACGATGAAA ACCTCTTGTT CCGTGTGGCT
CGCGAGTCGT TCGTGAGCGA AGAGGTCCTG GCCGAGGAGT ACGAGAAGAT CTTCGACCGC
TGCTGGCTTT ATGTTGGCCA CACATCCGAG TTCAAAAAGC CTGGCGATTT CGTCACTCGC
ACTGTCGCGC GCCGCAACCT GCTGGTGACA ATGGGAACGG ATCGGACGAT CAATGCTTTC
TTCAATACCT GCCCGCACCG TGGCGCCACT GTTTGCCGTG AGCGATCAGG CAACTCCAAG
AACTTCCAGT GCTTCTACCA TGGCTGGGTA TTCGGTTGCG ATGGCAACCT GAAGAGTCAG
CCTGGCAAGG AGCGCTATTG CGCTGACTTC ATTACTGGCG GCGCGGGCAA CCTAGTGCCG
GTGCCGCGCT TCGACATCTA CGCCGGCTTT TGCTTCGTCA GCTTCAATGC CGAGGTGGAA
CCACTGCCCG ACTATTTGGC AGGAGCCAAG GAGTACCTCG AACTGGTTTC CAAGTATTCC
GAGAGCGGCA TGGGTATCAC CACCGGCACC CAGGAATACG CCATCCGTGC AAACTGGAAA
TTGCTCGTTG AGAACAGTAT TGACGGCTAT CACGCTGTCA GCACCCACGC GAGTTATCTC
GACTACCTGA AAAACATCAA TGATGGCTTT TCGGGCGCCA AGCTCGAAGG CAAGAGCACT
GACCTCGGTA ATGGTCATGC GGTAATTGAA TTCAGTGCTC CTTGGGGACG GCCGATTGCC
TCCTGGGTTC CGATCTGGGG GGAGGAGGGC AAGCAAGAGA TCGACCAGAT CTATGCACGG
TTGGTCGAAC TGCATGGTGC GGAGATGGCC GACCGCATGG CGTACAAGAA CCGCAACCTG
CTGATTTTCC CGAATCTCAT CATCAACGAC ATCATGGCAA TTACGGTGCG GACCTTCTAT
CCGCAGGCGC CGAACTACAT GCATGTCAAC GGTTGGTCAT TGGCGCCGAA CGAGGAGTCC
GACTGGGCGC GCAAGTACCG CCTCAGCAAC TTCCTGGAGT TCCTTGGCCC AGGCGGTTTC
GCAACGCCGG ACGATGTCGA AGCGCTGGAG TCCTGCCAGA ACGGCTTCAG CAACTACCGA
CTGGTGCCGT GGAGCGACAT TTCCAAGGGA ATGGGCAAGG AAACGGCCAA CTACGACGAT
GAGCTGCAGA TGCGTGCTTT CTGGACGCGA TGGAACCAAT TCATCGGTGG CGCGCCCACG
CCCGACTCCG GCGTTCAATA CATACCTACC ATCGCTTTGG CCTGA
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| Protein sequence | MNNDKNLVEI DDENLLFRVA RESFVSEEVL AEEYEKIFDR CWLYVGHTSE FKKPGDFVTR
TVARRNLLVT MGTDRTINAF FNTCPHRGAT VCRERSGNSK NFQCFYHGWV FGCDGNLKSQ
PGKERYCADF ITGGAGNLVP VPRFDIYAGF CFVSFNAEVE PLPDYLAGAK EYLELVSKYS
ESGMGITTGT QEYAIRANWK LLVENSIDGY HAVSTHASYL DYLKNINDGF SGAKLEGKST
DLGNGHAVIE FSAPWGRPIA SWVPIWGEEG KQEIDQIYAR LVELHGAEMA DRMAYKNRNL
LIFPNLIIND IMAITVRTFY PQAPNYMHVN GWSLAPNEES DWARKYRLSN FLEFLGPGGF
ATPDDVEALE SCQNGFSNYR LVPWSDISKG MGKETANYDD ELQMRAFWTR WNQFIGGAPT
PDSGVQYIPT IALA
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