More than 300 homologs were found in PanDaTox collection
for query gene RSc1156 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc1156  methyl-accepting chemotaxis transducer transmembrane protein  100 
 
 
600 aa  1176    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.579054 
 
 
-
 
NC_010682  Rpic_0996  methyl-accepting chemotaxis sensory transducer  74.09 
 
 
601 aa  792    Ralstonia pickettii 12J  Bacteria  normal  0.947036  normal  0.198959 
 
 
-
 
NC_012856  Rpic12D_1092  methyl-accepting chemotaxis sensory transducer  74.71 
 
 
605 aa  770    Ralstonia pickettii 12D  Bacteria  normal  normal  0.703119 
 
 
-
 
NC_007974  Rmet_4195  methyl-accepting chemotaxis sensory transducer  58.06 
 
 
515 aa  533  1e-150  Cupriavidus metallidurans CH34  Bacteria  normal  0.766107  normal 
 
 
-
 
NC_010625  Bphy_5591  methyl-accepting chemotaxis sensory transducer  54.63 
 
 
519 aa  500  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
519 aa  476  1e-133  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  53.79 
 
 
519 aa  478  1e-133  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
618 aa  396  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  43.93 
 
 
617 aa  378  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  47.32 
 
 
671 aa  366  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
648 aa  367  1e-100  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  47.13 
 
 
673 aa  364  2e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  47.13 
 
 
673 aa  364  2e-99  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  46.93 
 
 
673 aa  362  1e-98  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  46.93 
 
 
673 aa  362  1e-98  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  46.93 
 
 
673 aa  362  1e-98  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  46.93 
 
 
673 aa  362  1e-98  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  40.46 
 
 
547 aa  361  2e-98  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  40.46 
 
 
547 aa  360  3e-98  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  40.46 
 
 
547 aa  360  5e-98  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  40.28 
 
 
547 aa  359  8e-98  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  45.72 
 
 
655 aa  357  1.9999999999999998e-97  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  47.4 
 
 
597 aa  356  8.999999999999999e-97  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  39.93 
 
 
547 aa  354  2e-96  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  46.34 
 
 
666 aa  354  2.9999999999999997e-96  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  39.67 
 
 
552 aa  353  4e-96  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
555 aa  353  7e-96  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
659 aa  351  3e-95  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  45.94 
 
 
566 aa  350  5e-95  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
596 aa  349  7e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
572 aa  349  1e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
648 aa  349  1e-94  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
567 aa  347  4e-94  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  55.07 
 
 
629 aa  344  2e-93  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
561 aa  345  2e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
570 aa  343  5e-93  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
559 aa  343  5e-93  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
584 aa  343  7e-93  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
549 aa  343  8e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  55.09 
 
 
591 aa  342  9e-93  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
575 aa  341  2e-92  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  51.3 
 
 
589 aa  340  4e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
547 aa  340  4e-92  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
594 aa  340  4e-92  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
522 aa  339  9e-92  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
522 aa  339  9e-92  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
562 aa  338  9.999999999999999e-92  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012560  Avin_51670  methyl accepting chemotaxis sensory transducer  42.35 
 
 
566 aa  338  9.999999999999999e-92  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  47.63 
 
 
580 aa  339  9.999999999999999e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  60.33 
 
 
557 aa  338  9.999999999999999e-92  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  60.33 
 
 
557 aa  338  9.999999999999999e-92  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  55.67 
 
 
621 aa  338  1.9999999999999998e-91  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
583 aa  338  1.9999999999999998e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
549 aa  338  1.9999999999999998e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
659 aa  338  1.9999999999999998e-91  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
659 aa  338  1.9999999999999998e-91  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  60.33 
 
 
557 aa  338  1.9999999999999998e-91  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  49.54 
 
 
588 aa  337  2.9999999999999997e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  40.98 
 
 
553 aa  337  2.9999999999999997e-91  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
551 aa  337  3.9999999999999995e-91  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2408  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
557 aa  337  3.9999999999999995e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  55.14 
 
 
555 aa  336  5.999999999999999e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  42.3 
 
 
551 aa  335  1e-90  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
554 aa  335  1e-90  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  49.1 
 
 
601 aa  335  1e-90  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
578 aa  335  1e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  60.67 
 
 
520 aa  335  1e-90  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_012892  B21_04198  hypothetical protein  42.3 
 
 
551 aa  335  1e-90  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
561 aa  335  2e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
657 aa  334  2e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  44.76 
 
 
554 aa  335  2e-90  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  44.76 
 
 
557 aa  335  2e-90  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  45.37 
 
 
554 aa  335  2e-90  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  45.37 
 
 
554 aa  334  2e-90  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  51.94 
 
 
553 aa  333  6e-90  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  56.27 
 
 
539 aa  333  6e-90  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  60.32 
 
 
591 aa  333  6e-90  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  45.64 
 
 
513 aa  333  7.000000000000001e-90  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
546 aa  333  8e-90  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  41.6 
 
 
661 aa  332  9e-90  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  48.08 
 
 
513 aa  332  1e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  52.97 
 
 
553 aa  332  1e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  42.13 
 
 
551 aa  332  1e-89  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  52.97 
 
 
553 aa  332  1e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  52.97 
 
 
553 aa  332  1e-89  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
562 aa  331  2e-89  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  52.71 
 
 
553 aa  332  2e-89  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  51.68 
 
 
553 aa  331  3e-89  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  51.68 
 
 
553 aa  331  3e-89  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  51.36 
 
 
553 aa  331  3e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0431  methyl-accepting chemotaxis sensory transducer  56.81 
 
 
539 aa  331  3e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  51.36 
 
 
553 aa  331  3e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  51.68 
 
 
553 aa  331  3e-89  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  51.68 
 
 
553 aa  331  3e-89  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  51.68 
 
 
553 aa  331  3e-89  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
595 aa  330  4e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  58.46 
 
 
561 aa  330  4e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  53.81 
 
 
553 aa  330  4e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  51.36 
 
 
553 aa  330  5.0000000000000004e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  56.1 
 
 
556 aa  330  6e-89  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
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