More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_3480 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  100 
 
 
533 aa  1073    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  90.62 
 
 
534 aa  947    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  73.46 
 
 
534 aa  776    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  65.37 
 
 
535 aa  626  1e-178  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  69 
 
 
538 aa  623  1e-177  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  57.09 
 
 
524 aa  547  1e-154  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  45.23 
 
 
546 aa  385  1e-106  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
522 aa  342  1e-92  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
522 aa  331  2e-89  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
522 aa  329  9e-89  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
522 aa  328  1.0000000000000001e-88  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
522 aa  328  2.0000000000000001e-88  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
526 aa  320  5e-86  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
523 aa  318  1e-85  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
523 aa  314  1.9999999999999998e-84  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
523 aa  313  5.999999999999999e-84  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  36.42 
 
 
525 aa  308  2.0000000000000002e-82  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  35.03 
 
 
527 aa  295  1e-78  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
696 aa  291  2e-77  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  33.86 
 
 
527 aa  285  1.0000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
695 aa  284  3.0000000000000004e-75  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
534 aa  281  2e-74  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  35.84 
 
 
696 aa  281  3e-74  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  38 
 
 
698 aa  277  4e-73  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
693 aa  276  5e-73  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
514 aa  276  6e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
693 aa  275  1.0000000000000001e-72  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
707 aa  252  1e-65  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
470 aa  238  3e-61  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
470 aa  236  7e-61  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
468 aa  233  6e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
511 aa  232  1e-59  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
470 aa  228  3e-58  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  32.88 
 
 
475 aa  221  3e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
495 aa  219  7.999999999999999e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
468 aa  218  2e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
468 aa  218  2e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
476 aa  218  2e-55  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
481 aa  218  2.9999999999999998e-55  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  31.89 
 
 
482 aa  212  1e-53  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
505 aa  212  2e-53  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  37.23 
 
 
598 aa  209  1e-52  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  30.7 
 
 
573 aa  208  2e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
454 aa  207  4e-52  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
484 aa  206  8e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  30.26 
 
 
487 aa  197  4.0000000000000005e-49  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
602 aa  197  5.000000000000001e-49  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  27.52 
 
 
715 aa  192  2e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  35.52 
 
 
598 aa  184  3e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  34.16 
 
 
598 aa  179  1e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
448 aa  174  3.9999999999999995e-42  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
525 aa  174  5e-42  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  33 
 
 
511 aa  166  8e-40  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
474 aa  158  2e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
578 aa  156  7e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
578 aa  151  3e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
578 aa  149  1.0000000000000001e-34  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
468 aa  145  2e-33  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
700 aa  143  8e-33  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
550 aa  142  9.999999999999999e-33  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
541 aa  142  9.999999999999999e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
533 aa  142  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
542 aa  140  7.999999999999999e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  36.04 
 
 
549 aa  139  1e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
533 aa  138  2e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
565 aa  137  6.0000000000000005e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_011830  Dhaf_0529  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
573 aa  136  9.999999999999999e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0116952  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  37.66 
 
 
541 aa  135  9.999999999999999e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
570 aa  136  9.999999999999999e-31  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
550 aa  136  9.999999999999999e-31  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
543 aa  135  1.9999999999999998e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
538 aa  134  3e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  38.18 
 
 
549 aa  134  3.9999999999999996e-30  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
547 aa  134  5e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
547 aa  134  5e-30  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
664 aa  134  6e-30  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  38.85 
 
 
658 aa  133  6.999999999999999e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  40.89 
 
 
533 aa  132  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
547 aa  132  1.0000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  25.55 
 
 
480 aa  132  1.0000000000000001e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
532 aa  132  2.0000000000000002e-29  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
584 aa  132  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
545 aa  132  2.0000000000000002e-29  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  37.19 
 
 
822 aa  131  2.0000000000000002e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
474 aa  132  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
549 aa  131  3e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
520 aa  131  4.0000000000000003e-29  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
540 aa  130  6e-29  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
544 aa  130  6e-29  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  33.23 
 
 
392 aa  130  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
1079 aa  129  1.0000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
563 aa  129  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
518 aa  129  1.0000000000000001e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
569 aa  129  1.0000000000000001e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  36.48 
 
 
528 aa  129  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
620 aa  129  2.0000000000000002e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
583 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
557 aa  128  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
700 aa  128  3e-28  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  34.26 
 
 
539 aa  128  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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