More than 300 homologs were found in PanDaTox collection
for query gene Noca_2430 on replicon NC_008699
Organism: Nocardioides sp. JS614



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  100 
 
 
378 aa  772    Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  75.41 
 
 
395 aa  561  1.0000000000000001e-159  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  71.73 
 
 
392 aa  542  1e-153  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  73.3 
 
 
400 aa  540  9.999999999999999e-153  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  69.58 
 
 
377 aa  531  1e-150  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  70.67 
 
 
397 aa  529  1e-149  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  72.05 
 
 
405 aa  526  1e-148  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  68.97 
 
 
420 aa  525  1e-148  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  69.15 
 
 
388 aa  520  1e-146  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  68.35 
 
 
428 aa  513  1e-144  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  67.1 
 
 
420 aa  513  1e-144  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  68.48 
 
 
397 aa  505  9.999999999999999e-143  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  66.49 
 
 
386 aa  503  1e-141  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  64.84 
 
 
414 aa  501  1e-141  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  66.58 
 
 
386 aa  499  1e-140  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  68.01 
 
 
372 aa  497  1e-139  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  67.29 
 
 
397 aa  498  1e-139  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  63.68 
 
 
413 aa  490  1e-137  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  66.23 
 
 
423 aa  491  1e-137  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  61.32 
 
 
407 aa  477  1e-133  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  63.4 
 
 
416 aa  473  1e-132  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  61.39 
 
 
412 aa  469  1.0000000000000001e-131  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  62.28 
 
 
421 aa  469  1.0000000000000001e-131  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  63.61 
 
 
370 aa  469  1.0000000000000001e-131  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  65.45 
 
 
405 aa  466  9.999999999999999e-131  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  62.47 
 
 
378 aa  461  1e-129  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  61.11 
 
 
376 aa  458  9.999999999999999e-129  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  63.07 
 
 
387 aa  458  9.999999999999999e-129  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  63.07 
 
 
387 aa  458  9.999999999999999e-129  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  59.22 
 
 
403 aa  459  9.999999999999999e-129  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  60.27 
 
 
376 aa  459  9.999999999999999e-129  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  61.99 
 
 
387 aa  456  1e-127  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  59.95 
 
 
378 aa  455  1e-127  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  62.8 
 
 
387 aa  456  1e-127  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  60.98 
 
 
378 aa  452  1.0000000000000001e-126  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  59.01 
 
 
404 aa  444  1e-123  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  60.59 
 
 
402 aa  442  1e-123  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  60.74 
 
 
394 aa  437  1e-121  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  51.97 
 
 
386 aa  357  2.9999999999999997e-97  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  51.45 
 
 
374 aa  356  2.9999999999999997e-97  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.57 
 
 
386 aa  355  5.999999999999999e-97  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  47.66 
 
 
376 aa  346  4e-94  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  48.97 
 
 
380 aa  344  2e-93  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  49.18 
 
 
358 aa  335  7e-91  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  48.36 
 
 
359 aa  332  5e-90  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  46.43 
 
 
392 aa  331  1e-89  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  46.43 
 
 
392 aa  331  1e-89  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  48.16 
 
 
372 aa  330  2e-89  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  47.87 
 
 
391 aa  330  3e-89  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  45.77 
 
 
387 aa  330  3e-89  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  46.93 
 
 
373 aa  329  4e-89  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  44.74 
 
 
356 aa  329  4e-89  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  47.23 
 
 
389 aa  329  5.0000000000000004e-89  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  47.37 
 
 
391 aa  328  9e-89  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  46.17 
 
 
374 aa  328  1.0000000000000001e-88  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  46.72 
 
 
359 aa  328  1.0000000000000001e-88  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  45.97 
 
 
373 aa  326  4.0000000000000003e-88  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  46.58 
 
 
393 aa  326  5e-88  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  47.34 
 
 
385 aa  325  9e-88  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  46.97 
 
 
379 aa  325  1e-87  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  45.91 
 
 
374 aa  324  1e-87  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  45.67 
 
 
384 aa  325  1e-87  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  46.97 
 
 
374 aa  324  2e-87  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  45.97 
 
 
366 aa  323  3e-87  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  46.58 
 
 
390 aa  323  4e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  46.7 
 
 
374 aa  322  6e-87  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  46.34 
 
 
383 aa  322  8e-87  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  48.03 
 
 
373 aa  321  9.999999999999999e-87  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  47.07 
 
 
380 aa  321  9.999999999999999e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  44.88 
 
 
380 aa  320  3e-86  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  47.51 
 
 
373 aa  320  3e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  47.49 
 
 
388 aa  320  3e-86  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  44.88 
 
 
380 aa  320  3e-86  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  48.03 
 
 
373 aa  319  3.9999999999999996e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  47.07 
 
 
380 aa  320  3.9999999999999996e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  47.07 
 
 
380 aa  320  3.9999999999999996e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  47.07 
 
 
381 aa  318  7e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  44.21 
 
 
380 aa  319  7e-86  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  46.7 
 
 
380 aa  318  7e-86  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  47.07 
 
 
381 aa  318  1e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  45.65 
 
 
369 aa  318  1e-85  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  46.81 
 
 
381 aa  317  2e-85  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  42.37 
 
 
379 aa  317  2e-85  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  46.81 
 
 
381 aa  317  2e-85  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  46.81 
 
 
381 aa  317  2e-85  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  45.91 
 
 
385 aa  317  2e-85  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  46.15 
 
 
398 aa  317  2e-85  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  46.7 
 
 
383 aa  317  2e-85  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  46.81 
 
 
381 aa  317  2e-85  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  46.81 
 
 
381 aa  317  2e-85  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  43.95 
 
 
379 aa  317  3e-85  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  46.46 
 
 
379 aa  317  3e-85  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  45.31 
 
 
369 aa  316  4e-85  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  45.91 
 
 
376 aa  316  4e-85  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  45.65 
 
 
381 aa  315  7e-85  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009441  Fjoh_0369  carbamoyl phosphate synthase small subunit  45.63 
 
 
372 aa  315  9e-85  Flavobacterium johnsoniae UW101  Bacteria  normal  0.528508  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  48.54 
 
 
379 aa  315  9.999999999999999e-85  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  46.54 
 
 
381 aa  315  9.999999999999999e-85  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  44.2 
 
 
365 aa  314  9.999999999999999e-85  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  45.55 
 
 
376 aa  313  1.9999999999999998e-84  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>