More than 300 homologs were found in PanDaTox collection
for query gene Namu_4983 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  100 
 
 		 232 aa  457  9.999999999999999e-129  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  66.37 
 
 		 257 aa  295  4e-79  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  66.37 
 
 		 257 aa  295  4e-79  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  66.37 
 
 		 257 aa  295  4e-79  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  63.96 
 
 		 250 aa  289  2e-77  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  66.67 
 
 		 267 aa  290  2e-77  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  65.9 
 
 		 278 aa  285  5.999999999999999e-76  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  63.11 
 
 		 243 aa  278  6e-74  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  63.56 
 
 		 256 aa  276  2e-73  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  64.62 
 
 		 255 aa  276  2e-73  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  60.26 
 
 		 239 aa  271  4.0000000000000004e-72  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  62.98 
 
 		 270 aa  270  1e-71  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  60.26 
 
 		 239 aa  270  1e-71  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  63.96 
 
 		 237 aa  270  1e-71  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  63.47 
 
 		 251 aa  266  2.9999999999999995e-70  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  59.46 
 
 		 249 aa  265  5e-70  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  63.47 
 
 		 237 aa  265  5.999999999999999e-70  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  59.57 
 
 		 253 aa  260  2e-68  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  58.01 
 
 		 250 aa  259  3e-68  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  54.11 
 
 		 236 aa  258  5.0000000000000005e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  58.01 
 
 		 247 aa  258  6e-68  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  59.57 
 
 		 243 aa  255  3e-67  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  59.56 
 
 		 255 aa  254  5e-67  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  60.18 
 
 		 240 aa  254  1.0000000000000001e-66  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  58.3 
 
 		 259 aa  253  2.0000000000000002e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  59.01 
 
 		 261 aa  250  1e-65  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  57.26 
 
 		 241 aa  250  1e-65  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  53.68 
 
 		 266 aa  251  1e-65  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  60.63 
 
 		 249 aa  249  4e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  59.43 
 
 		 264 aa  247  1e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  57.87 
 
 		 232 aa  244  8e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  55.2 
 
 		 248 aa  240  1e-62  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  56.74 
 
 		 232 aa  240  1e-62  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  55.4 
 
 		 257 aa  237  9e-62  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  44.66 
 
 		 296 aa  226  2e-58  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.69 
 
 		 261 aa  147  1.0000000000000001e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  46.33 
 
 		 252 aa  146  3e-34  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  48.02 
 
 		 258 aa  145  6e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  53.17 
 
 		 217 aa  135  6.0000000000000005e-31  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  40 
 
 		 238 aa  129  4.0000000000000003e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.28 
 
 		 224 aa  127  2.0000000000000002e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  45.21 
 
 		 224 aa  124  2e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  46.88 
 
 		 236 aa  121  8e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  40.59 
 
 		 234 aa  120  1.9999999999999998e-26  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  46.27 
 
 		 223 aa  119  3e-26  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  46.27 
 
 		 223 aa  119  3.9999999999999996e-26  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  39.7 
 
 		 231 aa  118  9e-26  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  45.52 
 
 		 223 aa  117  1.9999999999999998e-25  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  37.31 
 
 		 232 aa  117  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  40.31 
 
 		 236 aa  116  3e-25  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  45.45 
 
 		 224 aa  115  3.9999999999999997e-25  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.27 
 
 		 229 aa  115  6.9999999999999995e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  35.05 
 
 		 224 aa  115  7.999999999999999e-25  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal  1 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  35.05 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  35.05 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  40.64 
 
 		 237 aa  114  1.0000000000000001e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3419  two component transcriptional regulator  35.75 
 
 		 242 aa  114  1.0000000000000001e-24  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  35.57 
 
 		 223 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  35.57 
 
 		 223 aa  113  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  36.36 
 
 		 223 aa  113  2.0000000000000002e-24  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  35.57 
 
 		 223 aa  114  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  35.57 
 
 		 223 aa  113  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  36.93 
 
 		 228 aa  113  2.0000000000000002e-24  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  35.83 
 
 		 230 aa  114  2.0000000000000002e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  35.57 
 
 		 223 aa  113  2.0000000000000002e-24  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_005957  BT9727_1191  response regulator  35.05 
 
 		 223 aa  113  3e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  37.56 
 
 		 239 aa  112  3e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  37.06 
 
 		 235 aa  112  5e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  39.89 
 
 		 256 aa  112  6e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  36.65 
 
 		 232 aa  112  6e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  34.3 
 
 		 237 aa  112  7.000000000000001e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  37.89 
 
 		 230 aa  111  1.0000000000000001e-23  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_010001  Cphy_3429  two component transcriptional regulator  33.33 
 
 		 233 aa  110  2.0000000000000002e-23  Clostridium phytofermentans ISDg  Bacteria  normal  0.0608192  n/a   
 
 
-
 
NC_011830  Dhaf_1752  two component transcriptional regulator, winged helix family  31.55 
 
 		 228 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000101966  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  35.45 
 
 		 239 aa  110  2.0000000000000002e-23  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  35.05 
 
 		 223 aa  110  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  35.05 
 
 		 223 aa  110  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  37.44 
 
 		 225 aa  110  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  35.38 
 
 		 235 aa  110  2.0000000000000002e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  35.05 
 
 		 223 aa  110  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  35.98 
 
 		 239 aa  110  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  34.3 
 
 		 236 aa  109  3e-23  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  41.78 
 
 		 235 aa  109  4.0000000000000004e-23  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  42.22 
 
 		 228 aa  109  4.0000000000000004e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  108  5e-23  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  34.92 
 
 		 239 aa  108  5e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  34.92 
 
 		 239 aa  108  5e-23  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  108  5e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  108  5e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  108  5e-23  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  36.17 
 
 		 238 aa  109  5e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  37.36 
 
 		 237 aa  108  8.000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  38.55 
 
 		 261 aa  108  8.000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  107  1e-22  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000130788 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  31.48 
 
 		 230 aa  108  1e-22  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_3871  two component transcriptional regulator, winged helix family  37.37 
 
 		 227 aa  107  1e-22  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000473157  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  34.92 
 
 		 239 aa  107  1e-22  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  33.87 
 
 		 224 aa  107  1e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  39.04 
 
 		 239 aa  106  2e-22  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  39.6 
 
 		 233 aa  107  2e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00991602 
 
 
-
 
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