More than 300 homologs were found in PanDaTox collection
for query gene Mext_1731 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  100 
 
 
321 aa  601  1.0000000000000001e-171  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  98.75 
 
 
321 aa  592  1e-168  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  95.02 
 
 
321 aa  516  1.0000000000000001e-145  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  63.04 
 
 
375 aa  381  1e-105  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  61.06 
 
 
375 aa  372  1e-102  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  66.79 
 
 
286 aa  345  4e-94  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  63.08 
 
 
289 aa  346  4e-94  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  60.92 
 
 
288 aa  341  1e-92  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  63.12 
 
 
286 aa  330  2e-89  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  63.89 
 
 
325 aa  315  6e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  63.85 
 
 
281 aa  312  4.999999999999999e-84  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  66.27 
 
 
322 aa  305  5.0000000000000004e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  61.79 
 
 
283 aa  302  5.000000000000001e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  65.34 
 
 
283 aa  302  6.000000000000001e-81  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  65.34 
 
 
283 aa  300  2e-80  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  61.69 
 
 
303 aa  294  2e-78  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  57.87 
 
 
362 aa  278  1e-73  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  58.96 
 
 
316 aa  265  1e-69  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  50.45 
 
 
322 aa  210  2e-53  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  48.66 
 
 
306 aa  207  2e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
246 aa  133  5e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
268 aa  124  2e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
283 aa  123  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  34.91 
 
 
261 aa  122  6e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.85 
 
 
249 aa  119  9e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
272 aa  117  1.9999999999999998e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
272 aa  116  5e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
272 aa  115  1.0000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  33.61 
 
 
251 aa  115  1.0000000000000001e-24  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  33.06 
 
 
284 aa  113  4.0000000000000004e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
250 aa  113  4.0000000000000004e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  32.4 
 
 
250 aa  112  6e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  32.13 
 
 
250 aa  112  7.000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  32.13 
 
 
250 aa  112  9e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  32.13 
 
 
250 aa  112  9e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  32.13 
 
 
250 aa  112  9e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  32.13 
 
 
250 aa  112  1.0000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
253 aa  111  1.0000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  32 
 
 
251 aa  111  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
278 aa  111  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  32 
 
 
251 aa  110  4.0000000000000004e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.6 
 
 
251 aa  109  5e-23  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
271 aa  110  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
268 aa  109  6e-23  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  30.8 
 
 
250 aa  108  1e-22  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
257 aa  108  2e-22  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
254 aa  108  2e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
260 aa  107  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
258 aa  107  2e-22  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  32.58 
 
 
279 aa  108  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
273 aa  104  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
255 aa  103  3e-21  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
273 aa  103  3e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  27.63 
 
 
265 aa  103  3e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  33.5 
 
 
281 aa  103  4e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
252 aa  103  5e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
268 aa  103  5e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
257 aa  103  5e-21  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
288 aa  102  7e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.64 
 
 
247 aa  102  1e-20  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
250 aa  102  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
258 aa  101  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  28.35 
 
 
263 aa  101  2e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
267 aa  100  3e-20  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
282 aa  100  3e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
288 aa  100  3e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  27.47 
 
 
274 aa  100  4e-20  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
258 aa  100  5e-20  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
222 aa  99.4  7e-20  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
238 aa  99.4  7e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
250 aa  99  9e-20  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.52 
 
 
298 aa  98.6  1e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  23.6 
 
 
249 aa  98.2  2e-19  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
260 aa  97.8  2e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
285 aa  97.8  2e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
258 aa  97.4  3e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
277 aa  95.9  8e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  30.65 
 
 
266 aa  95.9  8e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
282 aa  95.9  8e-19  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  29.55 
 
 
266 aa  95.9  8e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
247 aa  95.9  9e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
258 aa  95.5  1e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
299 aa  95.5  1e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
257 aa  95.1  1e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
256 aa  95.1  1e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
264 aa  95.5  1e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  29.67 
 
 
252 aa  94.4  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  25.11 
 
 
253 aa  94.7  2e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.79 
 
 
308 aa  94.7  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
264 aa  94.7  2e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
281 aa  94.4  3e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  30.56 
 
 
262 aa  94  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
279 aa  93.6  4e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
253 aa  93.6  4e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  31.03 
 
 
278 aa  92.8  6e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
317 aa  92.8  7e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
249 aa  92.8  7e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  30.99 
 
 
282 aa  92.8  7e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
284 aa  92.4  9e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  25.1 
 
 
254 aa  92.4  9e-18  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
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