More than 300 homologs were found in PanDaTox collection
for query gene Jden_0786 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_0786  binding-protein-dependent transport systems inner membrane component  100 
 
 
505 aa  1000    Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_26200  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  72.28 
 
 
505 aa  714    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.126847 
 
 
-
 
NC_012803  Mlut_15560  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  59.57 
 
 
506 aa  555  1e-156  Micrococcus luteus NCTC 2665  Bacteria  normal  0.031128  n/a   
 
 
-
 
NC_013595  Sros_7204  ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like protein  51.29 
 
 
502 aa  473  1e-132  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0276316 
 
 
-
 
NC_008541  Arth_2826  binding-protein-dependent transport systems inner membrane component  47.95 
 
 
513 aa  454  1.0000000000000001e-126  Arthrobacter sp. FB24  Bacteria  normal  0.392929  n/a   
 
 
-
 
NC_013235  Namu_4313  binding-protein-dependent transport systems inner membrane component  49.41 
 
 
507 aa  413  1e-114  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0958  binding-protein-dependent transport systems inner membrane component  46.85 
 
 
506 aa  407  1.0000000000000001e-112  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0982  binding-protein-dependent transport systems inner membrane component  42.63 
 
 
506 aa  381  1e-104  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.122029 
 
 
-
 
NC_012669  Bcav_1117  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
510 aa  359  7e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.348427  normal 
 
 
-
 
NC_014210  Ndas_4534  binding-protein-dependent transport systems inner membrane component  53.8 
 
 
336 aa  160  4e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.463935 
 
 
-
 
NC_013131  Caci_7778  binding-protein-dependent transport systems inner membrane component  52.74 
 
 
322 aa  159  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.413078 
 
 
-
 
NC_013159  Svir_31130  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  53.47 
 
 
338 aa  156  1e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2261  binding-protein-dependent transport systems inner membrane component  47.06 
 
 
325 aa  154  4e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.161114  normal 
 
 
-
 
NC_008578  Acel_1117  binding-protein-dependent transport systems inner membrane component  47.77 
 
 
327 aa  151  3e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  0.559973  normal  0.0105879 
 
 
-
 
NC_010718  Nther_0478  binding-protein-dependent transport systems inner membrane component  40.18 
 
 
321 aa  148  2.0000000000000003e-34  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0762  binding-protein-dependent transport systems inner membrane component  44.97 
 
 
332 aa  147  5e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4430  binding-protein-dependent transport systems inner membrane component  45.1 
 
 
325 aa  144  3e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.982552  normal 
 
 
-
 
NC_008146  Mmcs_3928  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
325 aa  144  4e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4002  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
325 aa  144  4e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3943  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
325 aa  144  4e-33  Mycobacterium sp. JLS  Bacteria  normal  normal  0.104136 
 
 
-
 
NC_014212  Mesil_2730  binding-protein-dependent transport systems inner membrane component  41.28 
 
 
331 aa  144  5e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11309  oligopeptide-transport integral membrane protein ABC transporter oppB  45.75 
 
 
325 aa  144  5e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3500  binding-protein-dependent transport systems inner membrane component  43.11 
 
 
355 aa  141  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0791674  n/a   
 
 
-
 
NC_010814  Glov_2033  binding-protein-dependent transport systems inner membrane component  46.91 
 
 
324 aa  140  3.9999999999999997e-32  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2257  oligopeptide ABC transporter, permease component  48.1 
 
 
321 aa  140  3.9999999999999997e-32  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2554  oligopeptide/dipeptide ABC transporter, permease protein  48.1 
 
 
321 aa  140  4.999999999999999e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0246  oligopeptide ABC transporter, permease protein  46.76 
 
 
307 aa  140  7e-32  Bacillus cereus B4264  Bacteria  normal  0.0542782  n/a   
 
 
-
 
NC_011772  BCG9842_B5079  oligopeptide ABC transporter, permease protein  46.76 
 
 
318 aa  140  7e-32  Bacillus cereus G9842  Bacteria  normal  0.823719  normal 
 
 
-
 
NC_009483  Gura_2050  binding-protein-dependent transport systems inner membrane component  49.3 
 
 
325 aa  139  7.999999999999999e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0209  binding-protein-dependent transport systems inner membrane component  47.1 
 
 
318 aa  139  8.999999999999999e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0220  binding-protein-dependent transport systems inner membrane component  46.76 
 
 
318 aa  139  1e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0206  oligopeptide ABC transporter, permease  46.76 
 
 
318 aa  139  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2276  binding-protein-dependent transport systems inner membrane component  48.15 
 
 
336 aa  139  1e-31  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00000000111157 
 
 
-
 
NC_011146  Gbem_2643  binding-protein-dependent transport systems inner membrane component  46.2 
 
 
326 aa  138  2e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0267  oligopeptide ABC transporter, permease protein  46.76 
 
 
318 aa  138  3.0000000000000003e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1223  Nickel-transporting ATPase  46.53 
 
 
339 aa  137  3.0000000000000003e-31  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0308435 
 
 
-
 
NC_012918  GM21_1591  binding-protein-dependent transport systems inner membrane component  49.64 
 
 
326 aa  138  3.0000000000000003e-31  Geobacter sp. M21  Bacteria  n/a    normal  0.75386 
 
 
-
 
NC_002939  GSU1434  peptide ABC transporter, permease protein  49.28 
 
 
326 aa  137  4e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.393954  n/a   
 
 
-
 
NC_009253  Dred_2453  binding-protein-dependent transport systems inner membrane component  48.61 
 
 
334 aa  137  4e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.17389  n/a   
 
 
-
 
NC_007517  Gmet_1235  binding-protein dependent transport system inner membrane protein  48.92 
 
 
333 aa  137  7.000000000000001e-31  Geobacter metallireducens GS-15  Bacteria  normal  0.391976  normal  0.26803 
 
 
-
 
NC_009832  Spro_2856  binding-protein-dependent transport systems inner membrane component  48.18 
 
 
322 aa  136  8e-31  Serratia proteamaculans 568  Bacteria  normal  normal  0.205475 
 
 
-
 
NC_011898  Ccel_1767  binding-protein-dependent transport systems inner membrane component  45.03 
 
 
321 aa  136  9.999999999999999e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.181911  n/a   
 
 
-
 
NC_003909  BCE_0249  oligopeptide ABC transporter, permease protein  46.04 
 
 
318 aa  135  1.9999999999999998e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0219  oligopeptide ABC transporter permease  46.04 
 
 
307 aa  135  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0210  oligopeptide ABC transporter, permease  46.04 
 
 
318 aa  135  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0242  oligopeptide ABC transporter, permease protein  46.04 
 
 
307 aa  135  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0232  oligopeptide ABC transporter permease protein  46.04 
 
 
318 aa  135  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0131  binding-protein dependent transport system inner membrane protein  46.26 
 
 
326 aa  134  3e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0873  binding-protein-dependent transport systems inner membrane component  48.44 
 
 
320 aa  134  3e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0307537  n/a   
 
 
-
 
NC_008609  Ppro_2014  binding-protein-dependent transport systems inner membrane component  45.06 
 
 
325 aa  134  3.9999999999999996e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  0.169122  n/a   
 
 
-
 
NC_008786  Veis_4291  binding-protein-dependent transport systems inner membrane component  41.56 
 
 
338 aa  134  3.9999999999999996e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1951  binding-protein-dependent transport systems inner membrane component  45.75 
 
 
325 aa  133  6e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.497916  normal 
 
 
-
 
NC_013926  Aboo_1254  binding-protein-dependent transport systems inner membrane component  49.62 
 
 
335 aa  132  1.0000000000000001e-29  Aciduliprofundum boonei T469  Archaea  normal  0.905382  n/a   
 
 
-
 
NC_007498  Pcar_1869  ABC-type transport system protein  47.83 
 
 
324 aa  132  1.0000000000000001e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0389  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
321 aa  132  1.0000000000000001e-29  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0405  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
321 aa  132  1.0000000000000001e-29  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4795  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
319 aa  132  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.540957  normal 
 
 
-
 
NC_010001  Cphy_0813  binding-protein-dependent transport systems inner membrane component  49.65 
 
 
328 aa  131  2.0000000000000002e-29  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00108438  n/a   
 
 
-
 
NC_008687  Pden_3801  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
314 aa  130  4.0000000000000003e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.207674 
 
 
-
 
NC_009767  Rcas_0384  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
319 aa  130  7.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.512992 
 
 
-
 
NC_011004  Rpal_0105  binding-protein-dependent transport systems inner membrane component  47.1 
 
 
326 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.109225  n/a   
 
 
-
 
NC_013131  Caci_5590  binding-protein-dependent transport systems inner membrane component  43.33 
 
 
326 aa  130  8.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.501197  normal  0.46158 
 
 
-
 
NC_013946  Mrub_2659  binding-protein-dependent transport systems inner membrane component  47.95 
 
 
334 aa  129  9.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  decreased coverage  0.000955673 
 
 
-
 
NC_014212  Mesil_2499  binding-protein-dependent transport systems inner membrane component  45.99 
 
 
334 aa  129  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0750217 
 
 
-
 
NC_007333  Tfu_1632  putative ABC transporter permease  46.15 
 
 
336 aa  129  1.0000000000000001e-28  Thermobifida fusca YX  Bacteria  normal  0.214794  n/a   
 
 
-
 
NC_002967  TDE1275  oligopeptide/dipeptide ABC transporter, permease protein  45 
 
 
317 aa  128  2.0000000000000002e-28  Treponema denticola ATCC 35405  Bacteria  unclonable  0.0000000495045  n/a   
 
 
-
 
NC_007519  Dde_1184  dipeptide ABC transporter, permease protein  45.14 
 
 
333 aa  129  2.0000000000000002e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0134333  n/a   
 
 
-
 
NC_010002  Daci_5670  binding-protein-dependent transport systems inner membrane component  44.78 
 
 
325 aa  129  2.0000000000000002e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.26218  normal  0.0546823 
 
 
-
 
NC_009767  Rcas_1059  binding-protein-dependent transport systems inner membrane component  46.38 
 
 
400 aa  129  2.0000000000000002e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.543295  normal 
 
 
-
 
NC_008751  Dvul_0779  binding-protein-dependent transport systems inner membrane component  45.77 
 
 
339 aa  128  2.0000000000000002e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0777268  normal  0.809759 
 
 
-
 
NC_010718  Nther_2797  binding-protein-dependent transport systems inner membrane component  35.1 
 
 
319 aa  128  3e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0607  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
335 aa  128  3e-28  Paracoccus denitrificans PD1222  Bacteria  normal  0.238126  normal 
 
 
-
 
NC_009524  PsycPRwf_1527  nickel-transporting ATPase  38.42 
 
 
338 aa  128  3e-28  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7099  binding-protein-dependent transport systems inner membrane component  41.83 
 
 
327 aa  127  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0408  peptide ABC transporter, permease protein  45.26 
 
 
319 aa  127  6e-28  Brucella suis 1330  Bacteria  normal  0.599742  n/a   
 
 
-
 
NC_013202  Hmuk_0216  binding-protein-dependent transport systems inner membrane component  44.83 
 
 
347 aa  127  7e-28  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.699223  normal 
 
 
-
 
NC_009504  BOV_A0351  peptide ABC transporter, permease protein  45.26 
 
 
319 aa  127  7e-28  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3297  binding-protein-dependent transport systems inner membrane component  42.25 
 
 
335 aa  126  7e-28  Jannaschia sp. CCS1  Bacteria  normal  0.204315  normal  0.181035 
 
 
-
 
NC_008254  Meso_1834  binding-protein-dependent transport systems inner membrane component  43.66 
 
 
326 aa  127  7e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6954  oligopeptide ABC transporter (substrate-binding protein)  45.77 
 
 
319 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1413  binding-protein-dependent transport systems inner membrane component  47.48 
 
 
332 aa  126  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.739242 
 
 
-
 
NC_013595  Sros_5912  binding-protein dependent transport system inner membrane protein  45.64 
 
 
339 aa  125  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.185264  normal  0.0388419 
 
 
-
 
NC_010718  Nther_2757  binding-protein-dependent transport systems inner membrane component  47.37 
 
 
306 aa  125  2e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4763  binding-protein-dependent transport systems inner membrane component  44.6 
 
 
327 aa  125  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0657  binding-protein-dependent transport systems inner membrane component  45.45 
 
 
313 aa  125  2e-27  Polaromonas sp. JS666  Bacteria  normal  0.18227  normal 
 
 
-
 
NC_008044  TM1040_0714  binding-protein-dependent transport systems inner membrane component  42.25 
 
 
335 aa  125  2e-27  Ruegeria sp. TM1040  Bacteria  normal  0.0299286  normal 
 
 
-
 
NC_013159  Svir_36520  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  45.45 
 
 
341 aa  125  2e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.445478  normal 
 
 
-
 
NC_011883  Ddes_1214  binding-protein-dependent transport systems inner membrane component  41.96 
 
 
344 aa  125  2e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1387  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
321 aa  125  2e-27  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.000859188  n/a   
 
 
-
 
NC_009380  Strop_4337  binding-protein-dependent transport systems inner membrane component  41.72 
 
 
319 aa  124  3e-27  Salinispora tropica CNB-440  Bacteria  normal  0.692549  normal  0.354058 
 
 
-
 
NC_009523  RoseRS_0414  binding-protein-dependent transport systems inner membrane component  44.2 
 
 
400 aa  125  3e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.71017  normal 
 
 
-
 
NC_010718  Nther_2641  binding-protein-dependent transport systems inner membrane component  41.38 
 
 
332 aa  124  3e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4683  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
305 aa  124  4e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4130  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
324 aa  124  4e-27  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0758  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
338 aa  124  4e-27  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0353588 
 
 
-
 
NC_011769  DvMF_0920  binding-protein-dependent transport systems inner membrane component  45.26 
 
 
343 aa  124  4e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.416644 
 
 
-
 
NC_011894  Mnod_1355  binding-protein-dependent transport systems inner membrane component  45.77 
 
 
319 aa  124  5e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1197  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
313 aa  124  5e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4779  binding-protein-dependent transport systems inner membrane component  42.38 
 
 
319 aa  124  5e-27  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000244558 
 
 
-
 
NC_008687  Pden_4284  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
323 aa  124  5e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.181861  normal 
 
 
-
 
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