| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7099 |
|---|
| Symbol | |
|---|
| ID | 8670410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7829713 |
|---|
| End bp | 7830696 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003342539 |
|---|
| Protein GI | 271968343 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAT TCCTTCTTCG CCGGCTGCTC AACTACCTGG TGCTGATCGT CGTGGCCACG
AGCCTGGCCT ACATGCTGGC GGCCAGCGCG CTCAACCCCC GGTCCAACTA CGAGGGCCGC
AACCCGCCGA TCCCGCAGGC GGTCATCGAC GCGCGCCTCA CCGAGCTCAA CCTGAACGAC
AGGACGCCGC TGTTCGAGCG CTATCTGACC TGGGCGGGCG ACGTCGTCCA CGGAGACTTC
GGCAAGACGG TGGCCGGCGG CTCGGTCGGC CAGGACCTGG GGCGGCGGGC CGGTGTCACC
CTGCGCCTGA TCACCATAGG GCTGATCCTG GGCAGCGTCA CCGGCGTGTT CGTCGGCGCC
TACGCGGCGG TCAAGCAGTA CGGCGTGTTC GACCGGCTGT CGACCGGCGC CTCCTTCGTC
GTCCTCGCGG TCCCCACGGT CGTGCTGGCC AACATCCTGA TCATCACCGG GGTCTGGTTC
AACGAGCTGG TCGGCGCGCA GGTCTTCCTG GTCAGCGGTG AGGCCACCCC CGGGCTGCGG
GGAGGCTTCC CCACCCAGGT GGTGGACCGG GTCCAGCACC TGATCCTGCC CACCCTGTCG
CTCTCGCTGG GGCTGATCGC CGTCTACAGC CGCTACCAGC GCAACATGAT GCTCGACGTG
CTCGGCGCCG ACTTCATCCG TACGGCCATG GCCAAGGGGT TGCGCCGCCG TACCGCGCTG
ACCAGGCACG CGTTGCGCAC CGCGCTGATC CCGGCGGTCA CCTACTTCGC CTTCACCTTC
GGCTCGCTGC TGGTCGGCAC CACCTTCACC GAGAAGATCT TCGGCTGGCA CGGCATGGGC
GAGCAGCTCG TCAACTCCAT CTCCACCAAC GACGTCAACA CCGTGGCCGC GATCAGTTGC
TTCGCGGCCT TCGCGGTCCT GGCGGCCTCG CTGGCCTCCG ACGTCCTCCA TGCCGTCCTC
GATCCCCGGG TCCGGGTGGG GTGA
|
|---|
| Protein sequence | MAGFLLRRLL NYLVLIVVAT SLAYMLAASA LNPRSNYEGR NPPIPQAVID ARLTELNLND
RTPLFERYLT WAGDVVHGDF GKTVAGGSVG QDLGRRAGVT LRLITIGLIL GSVTGVFVGA
YAAVKQYGVF DRLSTGASFV VLAVPTVVLA NILIITGVWF NELVGAQVFL VSGEATPGLR
GGFPTQVVDR VQHLILPTLS LSLGLIAVYS RYQRNMMLDV LGADFIRTAM AKGLRRRTAL
TRHALRTALI PAVTYFAFTF GSLLVGTTFT EKIFGWHGMG EQLVNSISTN DVNTVAAISC
FAAFAVLAAS LASDVLHAVL DPRVRVG
|
|---|
| |