| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6954 |
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| Symbol | oppB |
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| ID | 5149218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7288605 |
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| End bp | 7289564 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561636 |
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| Product | oligopeptide ABC transporter (substrate-binding protein) |
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| Protein accession | YP_001242747 |
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| Protein GI | 148258162 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACT ACCTTCTCAG GCGCCTCATC GTCGCTGTGC CGAGCCTGCT CGGCATCAGC
CTCATTCTGT TCGTGCTGCT CGCGCTGGCG CCGGGCGATC CGTTCGGCGA GCTCGCGACC
AATCCGAACG TGCCGCCCGA GGTGCGCGAG GCGCTGCGCG TCAAGTTCGG CATGAACGAT
CCGATCCTGC TGCGCTATGT GCGCTGGCTG ATCGCCATGA TGCATGGCGA TTGGGGCTTC
TCCTTCGCCA GCCGCGTCAA TGTCGACACG CTCATCCTGC AGCGGATTCC GACCACGCTC
TACGTGGTCG GCACCGCGCA GATCCTCGCG CTGGCGGTCG CGCTGCCGGT CGGCGTGCTG
GCGGCGCGGC GGCCTTATTC GATCTTCGAC CAGATCGCCA ACACCTTTGC CTTCATCGGC
TTTTCGCTGC CGACCTTCTT CACCGGCCTG CTGCTGATCC TGATCTTCAG CGTCAATCTC
GGCTGGCTGC CGTTCGTCTA CCGCGCCGAT CTGCAGGCGA CCGGCTGGCA ATGGTGGTGG
GAGAGCATCA AGCAGGCGAT CATGCCGATC ACGGTGCTCG GCCTGTATCA GGCCGCGTCC
TATACCCGCT ATGTGCGATC CGCGGTGCTC GACGTCATCA AGCTCGATTA TGTCACGACG
GCGCGCGCCA AGGGCCTCGA CGAGCGCAAG GTCATCGTCA AGCACGTGGT GCGCAATGCG
CTGATTCCGG TGGTGACCCT GGTGGCGCTG CAGATGCCGA CTGTGTTCGG CGGCGCCATC
GTCACCGAGC AGATCTTCCG CATTCCCGGC ATCGGCTCGC TGCTGATCAG CGCCATCCTC
GCCAACGACA CGCCTGTGAT CATGGCGGTG ACCTTCGTGT TCGCCTGCCT CGTCGTTCTC
TTCAACCTTA TCGCAGACAT TCTGTATGGC TGGCTTGACC CACGCATCTC CTTCCGTTGA
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| Protein sequence | MGNYLLRRLI VAVPSLLGIS LILFVLLALA PGDPFGELAT NPNVPPEVRE ALRVKFGMND
PILLRYVRWL IAMMHGDWGF SFASRVNVDT LILQRIPTTL YVVGTAQILA LAVALPVGVL
AARRPYSIFD QIANTFAFIG FSLPTFFTGL LLILIFSVNL GWLPFVYRAD LQATGWQWWW
ESIKQAIMPI TVLGLYQAAS YTRYVRSAVL DVIKLDYVTT ARAKGLDERK VIVKHVVRNA
LIPVVTLVAL QMPTVFGGAI VTEQIFRIPG IGSLLISAIL ANDTPVIMAV TFVFACLVVL
FNLIADILYG WLDPRISFR
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