Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0813 |
Symbol | |
ID | 5745293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1040714 |
End bp | 1041700 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641291927 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001557939 |
Protein GI | 160878971 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00108438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAT ATATTGTGAA AAGAGTTTTA ACTAGTGTAG TGATCTTATT CTTTGTATCA ATGATCATTT ATACAATCAT CCGCTGCATT CCAACTTCCT TTATCGAAAC ACTAGCGAGA GAAAAAGCCT CTCTTCCAGG AGCTAAAAGC TATACTGAAT GGTTAGATCA ATTAAAAGCT ACGTATGGTA TGGATAGTGG AATTATTCAA GGTTTCTTTC AATGGTTAGC ATCCGCAGTT CGCGGTGAAT TCGGTGATTC TTGGTATTTT AATATACCAG TAACTGAGAA GTTTGCCAAT GTTATTTGGG ACTCCTTTTA TCTTGGAGTA GTTTCTTTTG TTTTGCAGAT TGTTATTGCA ATACCACTTG GTATTCTTTC TGCAAGAAAA CAGTATAGTA GAACAGATTA TGCAATCACT GTATTTGCAT TAATTGGTAT CTCTTTACCA GGATTTTTCT TTGCAACAAT TCTTAAATTA ATCTTTTCTA TTCACCTTGG TTGGTTTGAT TTATATGGAA AAGTTGGTCG TTATTACGGC CAGTTAGATG CATGGGGAAA ATTCCTCGAT GTCGCGGCTC ATTTTGTATT GCCGATTGCT ACATTGACAA TTATTAGTGT TGGTAGCTTG ATGCGTTATA CAAGAACCAA TATGTTAGAA GTACTAAATT CGGATTTTAT CCGAACAGCG AGAGCTAAGG GTCTTTCTGA AAGTACAGTA ATCAATAAGC ATGCATTTAG AAATACACTG ATACCAATTG TAACAATCAT TGGTGGAACA CTTCCTGGAT TATTTGCAGG TGCTATGATT ACTGAAACAT TGTTCCAGAT TCCGGGTATC GGTTATACCT CTTATTTGGC CATGACAAGT GGTGATATTC CATTTTTCAT GTTTTACATG ACATTTATGG CAGCTTTAAC ATTGATGGGT AACTTAATAT CTGATATTTT ATACGCAGTG GTAGATCCTC GTGTACGTGT TGGATGA
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Protein sequence | MWKYIVKRVL TSVVILFFVS MIIYTIIRCI PTSFIETLAR EKASLPGAKS YTEWLDQLKA TYGMDSGIIQ GFFQWLASAV RGEFGDSWYF NIPVTEKFAN VIWDSFYLGV VSFVLQIVIA IPLGILSARK QYSRTDYAIT VFALIGISLP GFFFATILKL IFSIHLGWFD LYGKVGRYYG QLDAWGKFLD VAAHFVLPIA TLTIISVGSL MRYTRTNMLE VLNSDFIRTA RAKGLSESTV INKHAFRNTL IPIVTIIGGT LPGLFAGAMI TETLFQIPGI GYTSYLAMTS GDIPFFMFYM TFMAALTLMG NLISDILYAV VDPRVRVG
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