| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3928 |
|---|
| Symbol | |
|---|
| ID | 4112758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4184101 |
|---|
| End bp | 4185078 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638033071 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_641089 |
|---|
| Protein GI | 108800892 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGGT TCCTCGCGCG CCGGCTGCTC AACTACGTCG TGCTGTTGGC GCTCGCATCG
TTTTTGACGT TCACGCTGAC CTCCCTGACC TTCGAACCGC TCGACAGCCT GCTGCAGCGC
AACCCGCGGC CCCCGCAGTC GACCATCGAC GCGAAGGCGG CCGAACTCAA CCTCGACAAG
CCCATCCCCG TGCGCTACGC GCAGTGGCTG GGTGACGCGG TGCGCGGCGA CTTCGGCACC
ACGATCACCG GGCAGCCGGT CTCCGACGAG CTGGGCCGCC GGATCGGGGT CAGCCTGCGG
TTGCTGGTGA TCGGGTCGGT GCTGGGCACG GTCATCGGGG TCGTGGTCGG CGCGTGGGGC
GCGATCCGCC AGTACCGGCT GTCCGACCGG GTGATCACGC TGTTGTCGCT GCTCGTGCTG
TCCGCCCCGA CGTTCGTCAT CGCCAACCTG CTGATCCTCG GGGCGCTCAA CGCCAACTCC
TGGCTCGGCG TGCAACTGTT CGAGTACACC GGCGAGACCT CACCCGACGC CGTCGGCGGC
CCGTTCGACC AGTTCGTCGA CCGGTTGCAG CACCTGATCC TGCCGACGGT CACGCTCGCG
TTGGCGGCCA TCGCCGGGTT CAGCCGCTAT CAGCGCAACG CGATGCTCGA CGTCCTCGGC
CAGGACTTCA TCCGCACCGC GCGCGCCAAG GGTCTGACCC GGCGCCAGGC ACTGTTCAAA
CACGGTCTGC GCACCGCGCT CATCCCGATG GCGACGCTGT TCGCCTACGG GGTGAGCGGA
CTCGTGACCG GCGCGGTGTT CGTCGAGAAG ATCTTCGGCT GGCACGGGAT GGGCGAATGG
GTGGTGCAGG GCATCGCCAC GCAGGACACC AACATCATCG CGGCGATCAC GGTGTTCTCC
GGCGCCATGA TCCTGTTGGC CGGGTTGCTG TCCGACGTGA TCTACGCGGC GCTGGACCCG
AGAGTGCGGG TGCAGTGA
|
|---|
| Protein sequence | MTRFLARRLL NYVVLLALAS FLTFTLTSLT FEPLDSLLQR NPRPPQSTID AKAAELNLDK
PIPVRYAQWL GDAVRGDFGT TITGQPVSDE LGRRIGVSLR LLVIGSVLGT VIGVVVGAWG
AIRQYRLSDR VITLLSLLVL SAPTFVIANL LILGALNANS WLGVQLFEYT GETSPDAVGG
PFDQFVDRLQ HLILPTVTLA LAAIAGFSRY QRNAMLDVLG QDFIRTARAK GLTRRQALFK
HGLRTALIPM ATLFAYGVSG LVTGAVFVEK IFGWHGMGEW VVQGIATQDT NIIAAITVFS
GAMILLAGLL SDVIYAALDP RVRVQ
|
|---|
| |