| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1834 |
|---|
| Symbol | |
|---|
| ID | 4182135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1969597 |
|---|
| End bp | 1970577 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638067727 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_674392 |
|---|
| Protein GI | 110634184 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCCT ATCTGGTCAG GCGACTGCTT GTCATGATCC CGATGATGCT GATCGCCAGC
TTTCTCATGT TCGTCGTCAT CAGCTTCTCC GGCGATCCGC TCGCGGGATT GAAGACCATG
CAGCCGCCTC CGCCGCCCGA GGTGCTGCAC GCCATGGCGG TCAAGTTGAG GCTCGATCAG
CCACTTCTCG ACCGATACTG GATGTGGCTC TCCGGCCTGT TCGTCGGGGA TTTCGGGCCG
AGCATTCACA ATATCGATAT CGGTGCGGAG CTCGTGAAGC GCCTTGGTGT TTCGCTGCGG
CTCCTGGCGC TCGGCATCGT GCTCGCATTC TTGATGGCTG TCGCGGCGTC GGTTATCGGC
GCAGTGCTGC AGTTTTCCTG GGCCGACCAT ATTATCAGCT TCGTCGCCGT CGCGATGATA
TCGATGCCGG TGTTCTGGCT TGCGCTGCAG CTCAAGCGGC TGGCGATCAG CATCAATCAG
GAGCTTGGGT TCAGGCTGCT CTATACGTCC GGGGATGGCG CGGGCATGAC GGCGAGCACA
CCGTGGGATC GGGTGCTGCT TCTCATCGGT GTGCTGGCGC TCCCCACGAT CGCGCTTTCC
ATGCAGGCTT GCGGGAAATG GAGCCGCTAC GGCCGTGTGG CCCTAATCGA CGCGTTAAAC
AGCGAATATG TGAAGCTTGC CAGGGCCAAG GGCCTTTCGG AGACGCGCGT GGTGCTGGCG
CACGGCCTGC GAACCTCGCT TGCGCCTATG CTTACCGTTG TGGCTGCGGG CGGCGCCGTC
ATTCTCGGCG AGTCCGTCGT CACCGAGACG GTCTTCCAAT GGCGCGGGAT GGGAGACCTC
CTCGTCACCG GAATCCAGAA CAACGACGTC TATGTCGTTC TCGGCTGGCT GCTGGTGGCC
GGTCTCATCA TCATGGTCTT CAATCTGATT GCGGATATCC TCTATGCCGT CCTCGACCCC
CGCATCCGCT ATGAGCGATA G
|
|---|
| Protein sequence | MLAYLVRRLL VMIPMMLIAS FLMFVVISFS GDPLAGLKTM QPPPPPEVLH AMAVKLRLDQ
PLLDRYWMWL SGLFVGDFGP SIHNIDIGAE LVKRLGVSLR LLALGIVLAF LMAVAASVIG
AVLQFSWADH IISFVAVAMI SMPVFWLALQ LKRLAISINQ ELGFRLLYTS GDGAGMTAST
PWDRVLLLIG VLALPTIALS MQACGKWSRY GRVALIDALN SEYVKLARAK GLSETRVVLA
HGLRTSLAPM LTVVAAGGAV ILGESVVTET VFQWRGMGDL LVTGIQNNDV YVVLGWLLVA
GLIIMVFNLI ADILYAVLDP RIRYER
|
|---|
| |