| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0384 |
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| Symbol | |
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| ID | 5537846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 482279 |
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| End bp | 483238 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640892547 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430534 |
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| Protein GI | 156740405 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.512992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGT ACATCGCGCG ACGAGTCTTG ATTGCGATTC CAACGCTGTT GATTATCAGT
TTTGTGATTT TTGCGATTCT GGCGCTGGCG CCGGGCGATC CGCTGGCACA GTTTGCGCTC
AACCCGGCAA TCCCGGAGTC GACCCGCGAG TTGATCCGCA TTCAGTTTGG GCTTGATCAA
CCCTGGTATG TGCGCTATGT CAAATGGCTG ACGGCGCTGT CGCGCGGCGA TTGGGGATTC
TCGTTCGGCA CGCGCGGTCC GGTGATCGAT CTGATCTGGC AACGTCTGCC GCAGACCTTG
ATAGTGGTTG GAACGGCGTA CCTCATTGCG GTGCTGCTCG CCATTCCGAT CGGCGTTATT
TCGGCGGTGA AGCAGTATTC TGTGTTTGAT CAAGTGGCGA CCTTTCTTGC GTTCATCGGC
TTCTCCGTGC CGTCGTTCTT TACCGGTCTG GCATTAATGC TGGTGTTTGC CATTAATCTG
AAGTGGTTTC CGATTGTGTA CAACTCGACG CTCAATCTGG CCGGTTGGGA GGGGCTTGTC
GAACAGGCGC GTCAGATGGC GCTGCCGGTC ACCGTGCTTG TGGTGCAGCA AACGGCTGCG
CTGACCCGTT TTATGCGCTC GTCGATGCTC GATAATCTGC CGCTCGATTA TGTGCGCACT
GCGCGCGCCA AAGGATTGGC GGATCGGATG GTGATCATCC GCCACGTGTT GCGCAACAGT
ATGATTCCGG TAGTGACATT GATTGCGCTC GGTATTCCAA CGATTTTCGC GGGTGCGATT
ATTACCGAGA ACCTGTTCCG GGTCAACGGC ATTGGTCAGT TGTTGATCAC CTCGATTCAA
AATTCCGATA CGCCGGTTGT AATGGCGATT ACATTCATTT TTGCCTGTCT CACGGTCCTG
TTTAATCTGA TTGCCGATGT GCTCTACGGC GTGCTCGATC CTCGCGTGCG GTACAGTTAG
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| Protein sequence | MAQYIARRVL IAIPTLLIIS FVIFAILALA PGDPLAQFAL NPAIPESTRE LIRIQFGLDQ
PWYVRYVKWL TALSRGDWGF SFGTRGPVID LIWQRLPQTL IVVGTAYLIA VLLAIPIGVI
SAVKQYSVFD QVATFLAFIG FSVPSFFTGL ALMLVFAINL KWFPIVYNST LNLAGWEGLV
EQARQMALPV TVLVVQQTAA LTRFMRSSML DNLPLDYVRT ARAKGLADRM VIIRHVLRNS
MIPVVTLIAL GIPTIFAGAI ITENLFRVNG IGQLLITSIQ NSDTPVVMAI TFIFACLTVL
FNLIADVLYG VLDPRVRYS
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