Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11309 |
Symbol | |
ID | 5221986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1439907 |
End bp | 1440884 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640606063 |
Product | oligopeptide-transport integral membrane protein ABC transporter oppB |
Protein accession | YP_001287254 |
Protein GI | 148822500 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 424 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 236 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCT ATCTGGCCCG CCGGTTGCTC AACTACCTGG TGCTGCTGGC GCTGGCGTCG TTTTTGACGT ACTGCCTGAC CTCGCTGGCG TTCTCGCCGC TGGAAAGCCT GATGCAACGC AGTCCGCGCC CACCGCAAGC GGTTATCGAT GCCAAGGCAC ACGATCTCGG CTTGGACAGA CCCATACTGG CCCGCTACGC CAACTGGGTA TCGCATGCCG TCCGTGGCGA CTTCGGAACC ACCATCACCG GCCAGCCTGT CGGTACCGAA CTGGGGCGCC GGATCGGAGT CAGCCTGCGG CTGCTGGTCG TTGGATCGGT ATTCGGCACG GTGGCCGGTG TGGTGATCGG GGCGTGGGGT GCCATCCGGC AGTACCGGCT CAGCGACCGC GTCATGACCA CGCTGGCGCT GCTGGTGTTG AGCACACCGA CGTTTGTGGT GGCCAACCTG TTGATCCTGG GCGCCCTGCG GGTCAACTGG GCAGTGGGCA TCCAGCTTTT CGACTACACC GGGGAGACGT CACCCGGCGT TGCCGGCGGG GTGTGGGATC GGCTAGGCGA CCGGTTGCAG CATTTGATCC TGCCATCGCT GACGTTGGCG CTGGCGGCCG CCGCCGGGTT CAGCCGCTAC CAGCGCAACG CGATGCTGGA TGTCCTCGGC CAGGATTTCA TTCGCACCGC CCGCGCCAAG GGGCTGACCC GACGACGGGC CCTACTCAAG CATGGCCTGC GAACGGCGCT AATACCGATG GCCACGCTGT TCGCCTACGG GGTGGCCGGG TTGGTCACCG GAGCGGTTTT CGTCGAGAAG ATCTTCGGCT GGCACGGCAT GGGTGAATGG ATGGTCCGCG GTATCTCGAC TCAGGACACC AACATCGTCG CGGCAATTAC CGTGTTCTCC GGCGCGGTCG TGTTGCTGGC CGGTTTGCTC TCGGACGTGA TCTACGCGGC TTTGGACCCG AGGGTACGGG TGTCATGA
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Protein sequence | MTRYLARRLL NYLVLLALAS FLTYCLTSLA FSPLESLMQR SPRPPQAVID AKAHDLGLDR PILARYANWV SHAVRGDFGT TITGQPVGTE LGRRIGVSLR LLVVGSVFGT VAGVVIGAWG AIRQYRLSDR VMTTLALLVL STPTFVVANL LILGALRVNW AVGIQLFDYT GETSPGVAGG VWDRLGDRLQ HLILPSLTLA LAAAAGFSRY QRNAMLDVLG QDFIRTARAK GLTRRRALLK HGLRTALIPM ATLFAYGVAG LVTGAVFVEK IFGWHGMGEW MVRGISTQDT NIVAAITVFS GAVVLLAGLL SDVIYAALDP RVRVS
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