Gene TBFG_11309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11309 
Symbol 
ID5221986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1439907 
End bp1440884 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID640606063 
Productoligopeptide-transport integral membrane protein ABC transporter oppB 
Protein accessionYP_001287254 
Protein GI148822500 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones424 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones236 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT ATCTGGCCCG CCGGTTGCTC AACTACCTGG TGCTGCTGGC GCTGGCGTCG 
TTTTTGACGT ACTGCCTGAC CTCGCTGGCG TTCTCGCCGC TGGAAAGCCT GATGCAACGC
AGTCCGCGCC CACCGCAAGC GGTTATCGAT GCCAAGGCAC ACGATCTCGG CTTGGACAGA
CCCATACTGG CCCGCTACGC CAACTGGGTA TCGCATGCCG TCCGTGGCGA CTTCGGAACC
ACCATCACCG GCCAGCCTGT CGGTACCGAA CTGGGGCGCC GGATCGGAGT CAGCCTGCGG
CTGCTGGTCG TTGGATCGGT ATTCGGCACG GTGGCCGGTG TGGTGATCGG GGCGTGGGGT
GCCATCCGGC AGTACCGGCT CAGCGACCGC GTCATGACCA CGCTGGCGCT GCTGGTGTTG
AGCACACCGA CGTTTGTGGT GGCCAACCTG TTGATCCTGG GCGCCCTGCG GGTCAACTGG
GCAGTGGGCA TCCAGCTTTT CGACTACACC GGGGAGACGT CACCCGGCGT TGCCGGCGGG
GTGTGGGATC GGCTAGGCGA CCGGTTGCAG CATTTGATCC TGCCATCGCT GACGTTGGCG
CTGGCGGCCG CCGCCGGGTT CAGCCGCTAC CAGCGCAACG CGATGCTGGA TGTCCTCGGC
CAGGATTTCA TTCGCACCGC CCGCGCCAAG GGGCTGACCC GACGACGGGC CCTACTCAAG
CATGGCCTGC GAACGGCGCT AATACCGATG GCCACGCTGT TCGCCTACGG GGTGGCCGGG
TTGGTCACCG GAGCGGTTTT CGTCGAGAAG ATCTTCGGCT GGCACGGCAT GGGTGAATGG
ATGGTCCGCG GTATCTCGAC TCAGGACACC AACATCGTCG CGGCAATTAC CGTGTTCTCC
GGCGCGGTCG TGTTGCTGGC CGGTTTGCTC TCGGACGTGA TCTACGCGGC TTTGGACCCG
AGGGTACGGG TGTCATGA
 
Protein sequence
MTRYLARRLL NYLVLLALAS FLTYCLTSLA FSPLESLMQR SPRPPQAVID AKAHDLGLDR 
PILARYANWV SHAVRGDFGT TITGQPVGTE LGRRIGVSLR LLVVGSVFGT VAGVVIGAWG
AIRQYRLSDR VMTTLALLVL STPTFVVANL LILGALRVNW AVGIQLFDYT GETSPGVAGG
VWDRLGDRLQ HLILPSLTLA LAAAAGFSRY QRNAMLDVLG QDFIRTARAK GLTRRRALLK
HGLRTALIPM ATLFAYGVAG LVTGAVFVEK IFGWHGMGEW MVRGISTQDT NIVAAITVFS
GAVVLLAGLL SDVIYAALDP RVRVS