| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1434 |
|---|
| Symbol | |
|---|
| ID | 2685937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1572987 |
|---|
| End bp | 1573967 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637126108 |
|---|
| Product | peptide ABC transporter, permease protein |
|---|
| Protein accession | NP_952485 |
|---|
| Protein GI | 39996534 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.393954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCT ACATCTTCAA GCGACTCCTG GCAATGATCC CGTTGCTGTT CGGGATCACC
CTCATTACCT TCGTGGTGAT CCGGCTCGCC CCCGGGGAGC CGGTGGAGGC GATGACCGCC
ATGAGCCCCA AGATCACCGC CGAAACCCGC GAGCGGCTCC GGGAGTTCTA CGGACTCGAC
AAGCCGCTCC ATGAGCAGTA CGTTTCCTGG GTCGGCCGCA TCGTTAAGCT CGACTTCGGC
CGCTCCTTCG CCCCGGACAA CCGGCCGGTG ACCGACAAGA TCGCCGAGAG AATACCGGTG
ACCCTCTCCC TGAACATCAT TGCGCTGATC CTTGAATTCG GTCTCGCCAT CCCCATCGGT
ATCTTTGCCG CCACACACCG GGACACGATC TATGACAAGG GAATAACCCT CTTCGTCTTT
CTCGGGTTCG CCGTGCCGAC CTTCTGGCTG GCGCTGCTGC TGATGTATTT TTTCGGGGTG
AAACTGGGGT GGCTTCCCAT TTCGGGGCTC CACTCCCTGG GGAGCGAGAA CCTTTCACCC
CTGGCATGGT TCGCGGATAT GGTAAAGCAC TTGGTGCTGC CCGTGTTCGT GGCCACTTTC
GGCAGTCTGG CGGGGCTGTC GCGCTATATG CGCTCGAACA TGCTGGAGGT GATCCGCCAG
GACTATATCA CCACGGCCCG GGCCAAGGGG TTGTCCGAGC GTGTGGTCAT TTACCGCCAC
GCCCTGCGCA ACGCACTGCT GCCCGTCATC ACGCTTCTGG GTTTTTCCCT GCCGGGGCTC
ATCGGAGGGA GTGTCATCTT CGAGACGATT TTCGCCATCC CGGGCATGGG ACAGCTCTTC
TACCAAGGGG TCATGGCCCG CGACTATCCG CTTGTCATGG GGATTCTCGT CATCGGCGCG
TTCCTTACGC TCATCGGTAA CCTGCTGGCC GATGTCTGCT ATGCCATGGC CGATCCGCGC
ATCCGGCACG GAAGGGGGTA G
|
|---|
| Protein sequence | MAAYIFKRLL AMIPLLFGIT LITFVVIRLA PGEPVEAMTA MSPKITAETR ERLREFYGLD
KPLHEQYVSW VGRIVKLDFG RSFAPDNRPV TDKIAERIPV TLSLNIIALI LEFGLAIPIG
IFAATHRDTI YDKGITLFVF LGFAVPTFWL ALLLMYFFGV KLGWLPISGL HSLGSENLSP
LAWFADMVKH LVLPVFVATF GSLAGLSRYM RSNMLEVIRQ DYITTARAKG LSERVVIYRH
ALRNALLPVI TLLGFSLPGL IGGSVIFETI FAIPGMGQLF YQGVMARDYP LVMGILVIGA
FLTLIGNLLA DVCYAMADPR IRHGRG
|
|---|
| |