| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5590 |
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| Symbol | |
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| ID | 8336950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6442719 |
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| End bp | 6443699 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958694 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003116290 |
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| Protein GI | 256394726 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.501197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.46158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCCTT TCCTGCTGCG CAGGATCGTC AACTACCTGG TTCTGATCAC TTTGGCGACG
TGCCTGGGCT ACCTGCTCGC GGCGTCCAGC CTCAGTCCCC GGGAGTACTT CTCGCGCCGG
CAGCCCCCGC CGCCGGCCGC GTCCGTCAAC GCCACGCTCA CCCAGCTGAA CCTCAACGAC
AAGACGCCTT TGCCGGACCG GTTCGAGCAC TGGGCCGGCG GGGTGCTGAC CGGGGACCTG
GGCAAGACCA TCGACGACAC GTCGGTGTCG GCGGAGATGG GGCGGCGGAT CGGGGTGACG
CTGCGGCTGG TGCTGGTCGG CACGATCAGC GGCGCGCTGG TCGGGGTCGC GCTCGGGTTC
GTCTCGGCCA TCAGGCAGTA CCGACCATCG GACCACGCGA TCACCTTCCT GTCCTTCCTG
GTCCTGTCCA CGCCGGTGTT CCTGTTGGCG GTGCTGCTGA AGATCGGCAC GGTGAAGGTC
AACCAAGCCG CCGGCACCAC GTTGCTGCCG TACACCAACG AGACGACGCC GGGGCTGGCG
GGAGGCTGGC TCCGGCACCT CACCGACCGC GCGCAGCACC TGGTCGTGCC GACCCTGTCG
CTGATGCTCG GGCAGGCGGC GCTGTTCAGC CGGTATCAGC GCTCGGCGAT GCTCGACGTA
CTCGGCGCGG ACTACATCCG TACGGCGCGC GCCACCGGCA TGCGGCGCGG GCCGGCACTG
GTCAAGCACG GGCTTCGCAC GGCCCTGATA CCCATGGCGA CATTGTTCGC CTACCAGATG
GGGTTGCTGC TCACCGGTGT GACGTTCACC GAGAAGATCT TCGGCTGGCA CGGTATGGGC
GAGTGGTTCG TGGACTCGAT CGGGCGCGAG GACGTGAACT CCGTGGCCGC GATGGTGCTG
TTCACCGCCG TGCTGGTGCT GATAGCCGGG CTGCTCTCGG ACATCGCGCA CGCGCTGCTG
GACCCGCGGG TGCGCGTCTG A
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| Protein sequence | MGPFLLRRIV NYLVLITLAT CLGYLLAASS LSPREYFSRR QPPPPAASVN ATLTQLNLND
KTPLPDRFEH WAGGVLTGDL GKTIDDTSVS AEMGRRIGVT LRLVLVGTIS GALVGVALGF
VSAIRQYRPS DHAITFLSFL VLSTPVFLLA VLLKIGTVKV NQAAGTTLLP YTNETTPGLA
GGWLRHLTDR AQHLVVPTLS LMLGQAALFS RYQRSAMLDV LGADYIRTAR ATGMRRGPAL
VKHGLRTALI PMATLFAYQM GLLLTGVTFT EKIFGWHGMG EWFVDSIGRE DVNSVAAMVL
FTAVLVLIAG LLSDIAHALL DPRVRV
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