| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3297 |
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| Symbol | |
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| ID | 3935770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3350917 |
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| End bp | 3351924 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905670 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511239 |
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| Protein GI | 89055788 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.204315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.181035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCT TCACCATCCG CCGCCTGATC CTTGCGATCC CGACGCTGAT CTTTATCAGC
TTCATTATTT TCCTGATCGT GAAGCTCTCG CCCTCGGACC CTACGGCCGG GCTGCCTCTG
ACGATCCCGC CAGAGGTGCG CGAAGCGATC CGCGAAAGCC TGGGCGTCAA TGATCCGGTC
TTCGTGCAAT ACTTCAAGTG GCTCAAGCTG ATGATGTGGG ACGAGCCGCT GCACCTGATG
GATGGCTGGT TCGGCACGGA AATGGCGCCG GACGGCCCCC GGATCATCAG CTATCAGACC
CGGTCCCCGG TGATGGATCT GATCATGCAG CGGATGCCGC AGACCCTTTG GGTTGTGGGC
ACGTCGTATA TCGTCGGTAT TCTGATCGCC GTGCCGCTGG GGGTCATCTC GGCCTACCGG
CAATATTCGT GGTTCGACCA GATCGGGACG TTTGTCTCGA TGATCGGCTT TTCGGTGCCC
ACCTTCTTCA CCGGCGTGTT GTTCATCGTC ATCTTCGCAG TGAACCTGGG CTGGTTCCCG
TCGGTCTATG ACACCACGCT GGAGGTCACC AACTGGGAGA CGTTCTGGAC CCAGATCCGC
CAGATGATCA TGCCCGTCAT GGTCCTAGGC CTGTTCAACG CCAGCCAGAT CAGCCGCTAT
ATGCGTGCCT CGATGCTCGA CAACCTCAAT CAGGACTATG TGCGGACCGC GCGGGCCAAG
GGTCTGGGCG AAAGCGTTGT CGTGCTGGTC CACGTGCTGC GCAACTCCAT GATCCCGGTC
GTGACCGTCA TCGCGCTGAA CGTGCCTGCC GTCTTCGGCG GTGCGATCAT CACCGAGCAG
GTCTTCAAGG TGAACGGAAT CGGCCAGCTG CTGATCATCG CCATCCAGGC CGGGGACGTA
CCGGTGGTGC AGACCGTCAG CTTCATCTTC GCGATCCTGA TCGTGCTCTT CAACCTGCTC
GCCGATATTC TCTACGGCGT GCTGGACCCC CGCATTCGTT ATGATTGA
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| Protein sequence | MLTFTIRRLI LAIPTLIFIS FIIFLIVKLS PSDPTAGLPL TIPPEVREAI RESLGVNDPV
FVQYFKWLKL MMWDEPLHLM DGWFGTEMAP DGPRIISYQT RSPVMDLIMQ RMPQTLWVVG
TSYIVGILIA VPLGVISAYR QYSWFDQIGT FVSMIGFSVP TFFTGVLFIV IFAVNLGWFP
SVYDTTLEVT NWETFWTQIR QMIMPVMVLG LFNASQISRY MRASMLDNLN QDYVRTARAK
GLGESVVVLV HVLRNSMIPV VTVIALNVPA VFGGAIITEQ VFKVNGIGQL LIIAIQAGDV
PVVQTVSFIF AILIVLFNLL ADILYGVLDP RIRYD
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