Gene Nther_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2797 
Symbol 
ID6314464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3021724 
End bp3022683 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content38% 
IMG OID642645169 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001918933 
Protein GI188587388 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAT ATATAGTTAG AAGAATTCTT CAACTTATCC CTACAATTAT TGGGGTTACT 
ATAATTGTTT TTTTGGTAAT CAATGCAGCC CCGGGTAATC CCATGAGCGG AATGGTAGAC
CCCAATTTGA CTGAGGAAGA AATCGATCGT CAATTAGAAG AAATGGGATT AAAAGATCCT
ATACACCAAC GTTATTGGAG CTGGATTACG CAAGTAATCC AAGGAGATCT GGGATATTCA
TTCAGATATC ATGTTCCGGT AGAAAGTTTG ATTGGTTCCA GGATAGGTCC AACATTTATG
CTTTCCTTTT CTGCCTTATT CGTCAGTATT TTATTAGCGG TTCCGATAGG TGTGCTGTCT
GCTACTAGGC AATATTCCAA AGTAGATAAC TTGTTTACTG TTATTGCAAT TGGAGGAGTA
TCTATTCCCG TGTTTTTCCT GGGTATTTTG CTGATTAAAT TCCTTGCCTT TGATTTTCAA
ATATTCCCAA CAGGAGGTTA TCCAAACCTG AGTGATGAAA ATTTCTTTAC TGCTATACCT
AGAGTTTTGC ATCATTTGAT ACTTCCCATG ATTGCTTTAG CTGCAGCCCA AACTGCTAGG
TTTATGCGTT ATACTAGATC CAGTATGCTA GAAGTTATTA AACAGGATTA TGTAAGAACT
GCTAGGGCTA AAGGCTTATC AGAGAAAATA GTTATTTATA AACATGCCCT GCGTAATGCT
TTGATACCAG TCATCACACT CCTCGGTTTA ACCCTTCCGT TCTTATTCTC CGGAGCTATA
TTAACAGAAA CGGTCTTTGT ATGGCCCGGT ATGGGTAGAT TATTGCTAGA CTCTGTACAT
GACAGGGATT ATCCTCTGTT AATGGGTATA AATCTGTTCT TTGCCTTTAT GGTAATGCTG
GGTAATTTAC TGGCAGATGT GTTATATGCC GTTGTTGATC CCCGCATTAA ATATAATTAA
 
Protein sequence
MYQYIVRRIL QLIPTIIGVT IIVFLVINAA PGNPMSGMVD PNLTEEEIDR QLEEMGLKDP 
IHQRYWSWIT QVIQGDLGYS FRYHVPVESL IGSRIGPTFM LSFSALFVSI LLAVPIGVLS
ATRQYSKVDN LFTVIAIGGV SIPVFFLGIL LIKFLAFDFQ IFPTGGYPNL SDENFFTAIP
RVLHHLILPM IALAAAQTAR FMRYTRSSML EVIKQDYVRT ARAKGLSEKI VIYKHALRNA
LIPVITLLGL TLPFLFSGAI LTETVFVWPG MGRLLLDSVH DRDYPLLMGI NLFFAFMVML
GNLLADVLYA VVDPRIKYN