Gene Mkms_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4002 
Symbol 
ID4611942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4218583 
End bp4219560 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID639793686 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_939984 
Protein GI119870032 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGT TCCTCGCGCG CCGGCTGCTC AACTACGTCG TGCTGTTGGC GCTCGCATCG 
TTTTTGACGT TCACGCTGAC CTCCCTGACC TTCGAACCGC TCGACAGCCT GCTGCAGCGC
AACCCGCGGC CCCCGCAGTC GACCATCGAC GCGAAGGCGG CCGAACTCAA CCTCGACAAG
CCCATCCCCG TGCGCTACGC GCAGTGGCTG GGTGACGCGG TGCGCGGCGA CTTCGGCACC
ACGATCACCG GGCAGCCGGT CTCCGACGAG CTGGGCCGCC GGATCGGGGT CAGCCTGCGG
TTGCTGGTGA TCGGGTCGGT GCTGGGCACG GTCATCGGGG TCGTGGTCGG CGCGTGGGGC
GCGATCCGCC AGTACCGGCT GTCCGACCGG GTGATCACGC TGTTGTCGCT GCTCGTGCTG
TCCGCCCCGA CGTTCGTCAT CGCCAACCTG CTGATCCTCG GGGCGCTCAA CGCCAACTCC
TGGCTCGGCG TGCAACTGTT CGAGTACACC GGCGAGACCT CACCCGACGC CGTCGGCGGC
CCGTTCGACC AGTTCGTCGA CCGGTTGCAG CACCTGATCC TGCCGACGGT CACGCTCGCG
TTGGCGGCCA TCGCCGGGTT CAGCCGCTAT CAGCGCAACG CGATGCTCGA CGTCCTCGGC
CAGGACTTCA TCCGCACCGC GCGCGCCAAG GGTCTGACCC GGCGCCAGGC ACTGTTCAAA
CACGGTCTGC GCACCGCGCT CATCCCGATG GCGACGCTGT TCGCCTACGG GGTGAGCGGA
CTCGTGACCG GCGCGGTGTT CGTCGAGAAG ATCTTCGGCT GGCACGGGAT GGGCGAATGG
GTGGTGCAGG GCATCGCCAC GCAGGACACC AACATCATCG CGGCGATCAC GGTGTTCTCC
GGCGCCATGA TCCTGTTGGC CGGGTTGCTG TCCGACGTGA TCTACGCGGC GCTGGACCCG
AGAGTGCGGG TGCAGTGA
 
Protein sequence
MTRFLARRLL NYVVLLALAS FLTFTLTSLT FEPLDSLLQR NPRPPQSTID AKAAELNLDK 
PIPVRYAQWL GDAVRGDFGT TITGQPVSDE LGRRIGVSLR LLVIGSVLGT VIGVVVGAWG
AIRQYRLSDR VITLLSLLVL SAPTFVIANL LILGALNANS WLGVQLFEYT GETSPDAVGG
PFDQFVDRLQ HLILPTVTLA LAAIAGFSRY QRNAMLDVLG QDFIRTARAK GLTRRQALFK
HGLRTALIPM ATLFAYGVSG LVTGAVFVEK IFGWHGMGEW VVQGIATQDT NIIAAITVFS
GAMILLAGLL SDVIYAALDP RVRVQ