| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7778 |
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| Symbol | |
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| ID | 8339154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9018057 |
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| End bp | 9019025 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960862 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003118443 |
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| Protein GI | 256396879 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.413078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCT TCACGATCCG CCGCCTGCTG GTGTCGATCC CCATCCTGAT CCTGTCCACG
TTCCTGGTCT TCCTGCTGGT GGCCTGGGGC GCGGACCCGC TGGGCGACTT CAAGTCCAAG
AACCCGCCGC CGTCCGCGGC CGAGGTCGCC GCGCGCGAGC ACGCGCTCGG CCTGGACCAC
GGCCTGCTGG TCCAGTACTG GAACTGGATC AAGAACCTGG TGCTCCACGG CGACTTCGGG
CCCTCGGTGC AGGGCTCGGC CTTCGACATC AACGCCGAGC TCGGCCGCCG GACCTGGGTC
ACCTTCCGGC TGGTGATCTG CGCCATCATC ATCGCGCTGA TCCTGGCCGT GGTGGTCGGC
GTGATCACGG CGATGAAGCA GTACAGCATC ACCGACTACG TCGCGACCCT GATCGGCTTC
TTCTTCCTGT CGCTGCCGGT GTTCTGGTTC GCGATCCTGC TCAAGATCTG GGCCACCGAC
ATCAACAACT CCCTGGGCAC GAACATCAAG ACCCTGGGGC CGCCGGGAGG CCAGTGGGGC
GGGATCGGCA GCTGGGCCGG GTACCTGGTG CTGCCGACCA TCACCTTGGC GCTGAGCTCC
TACGCCACCT GGGCCCGGTT CCAGCGGGCG TCGATGCTGG ACGTGCTGAA CAGCGACTAC
ATGCGGCTGG CCCGGGCCAA GGGCCTGACG CCGAGGCGGG TCATGGTCCG CCACGGCCTG
CGCACCGCGC TGATCCCGAT GACCACGCAG GTGACCCTGG ACGTCGCGGC GATCATGGGC
GGCACGGTGA TCACCGAGCG CATCTTCCAG TGGCAGGGCC TGGGCACGAT GTTCATCAAC
GGCATCCAGA CCCAGGACAC CAACACGGTG CTGGCCTGGC TGCTGATCTC GGCGACCCTG
GTGATCGTCT TCAACCTGAT CGCGGACCTG CTCTACGCGG TCCTGGACCC CCGCATCCGG
CTGGCGTAG
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| Protein sequence | MIAFTIRRLL VSIPILILST FLVFLLVAWG ADPLGDFKSK NPPPSAAEVA AREHALGLDH
GLLVQYWNWI KNLVLHGDFG PSVQGSAFDI NAELGRRTWV TFRLVICAII IALILAVVVG
VITAMKQYSI TDYVATLIGF FFLSLPVFWF AILLKIWATD INNSLGTNIK TLGPPGGQWG
GIGSWAGYLV LPTITLALSS YATWARFQRA SMLDVLNSDY MRLARAKGLT PRRVMVRHGL
RTALIPMTTQ VTLDVAAIMG GTVITERIFQ WQGLGTMFIN GIQTQDTNTV LAWLLISATL
VIVFNLIADL LYAVLDPRIR LA
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