| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2554 |
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| Symbol | |
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| ID | 4201585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2813823 |
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| End bp | 2814788 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083421 |
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| Product | oligopeptide/dipeptide ABC transporter, permease protein |
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| Protein accession | YP_696944 |
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| Protein GI | 110801278 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTACAGT ATATCACTAG AAGAATACTA TTAATAATAC CGACTATTGT TGGCGTATCA
TTAGTACTTT TCTTCATATT TGCTATGGCT CCAGGAGATG CTATTACAGC AAATATGGAT
CCAAATATGA GTGTAGAAAC AAAACAAGCA ATAAGAGAAA AATATCATTT AGATGAGCCA
AAAACAACAC AGTACATGTA TTGGTTAAAA GGCGTTGTAA CAGAAGGGTC TTTAGGAGAA
TCTTTTTACT ATAAAAGACC AGTTTCAGAA GTAATGAAAG ATTTTATACC AAATTCCTTT
ATTTTAGGAG CGGCATCACT AATTTTGGGG CTTATAATTG CGGTGCCAAT AGGTATAGTT
TCAGCAACAA AGCAATATTC ATTTTTTGAT AAATTTTTTA CGGTATTTGC CCTTATGGGA
ATATCAATGC CATCATTTTT CTTTGGACTT ATATTAATTA AATATTTAGG AGTTCAACTT
AATTTATTTC CAATATCGGG TATGACTACT CCAGGAAGTG CATATACAGG AATGCAATAT
GTTCTAGATG TATTAAAACA TATGATTTTA CCACTTATAG TTTTAACTCT TGGAAGTGTA
GGTGGATGGA TGAGATACAC AAGATCAAGT ATGCTTGAGG TAGTTAGACA AGATTATATA
AGAACTGCTA GAGCAAAAGG ATTAAAAGAG AAGGTAGTTA TATATAAACA TGCTTTAAGA
AATGCACTTA TACCAGTTGT AACACTATTA GGAATGTCAA TTCCAGGATT ATTCTCAGGT
GCTACATTAA CAGAAAAAAT ATTTAACTGG CCAGGAATAG GTCCAGTACA GTTAAGTGCA
GTTAATAACA GAGATTATTA TCTACTTATG GGTATAAACC TTACTTTGGC TATATTAGTT
TTAATAGGAA ACTTACTTGC TGATATTATA TATGCATTAG TAGATCCAAG AATAAGGCTT
AAGTAG
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| Protein sequence | MLQYITRRIL LIIPTIVGVS LVLFFIFAMA PGDAITANMD PNMSVETKQA IREKYHLDEP
KTTQYMYWLK GVVTEGSLGE SFYYKRPVSE VMKDFIPNSF ILGAASLILG LIIAVPIGIV
SATKQYSFFD KFFTVFALMG ISMPSFFFGL ILIKYLGVQL NLFPISGMTT PGSAYTGMQY
VLDVLKHMIL PLIVLTLGSV GGWMRYTRSS MLEVVRQDYI RTARAKGLKE KVVIYKHALR
NALIPVVTLL GMSIPGLFSG ATLTEKIFNW PGIGPVQLSA VNNRDYYLLM GINLTLAILV
LIGNLLADII YALVDPRIRL K
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