Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1235 |
Symbol | |
ID | 3738412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1393783 |
End bp | 1394784 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778515 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_384196 |
Protein GI | 78222449 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.391976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.26803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCCCG TTCTCCGACT TATGATCACT TATCTTGCAA AGCGACTAAT AATGATGGTT CCGCTCCTCC TGGGGATTAC CCTCATCTCC TTTGTGGTGA TCCGCCTGGC CCCCGGCGAG CCGGTGGAGG CCATGACCGC CATGAGCCCC AAAATCACCG CCGAGACCCG CCAGCGGCTC CGGGAGTTCT ATGGTCTCGA CAAGCCGCTC CACGTCCAGT ACGCCACCTG GCTCAAACAG GTGGCCACCC TCGATTTCGG CCGCTCTTTC GCCCCCGACA ATCGGCCGGT GACCGACAAG ATCAAGGAAC GGATTCCGGT TACCATTTCC CTCAACGTCA TCGCCCTGAT CCTGGAGTTC GGCCTTGCCA TACCCATCGG CATCTTTGCG GCCACCCACC GGGACACCCT CTACGACAAG GGGATCACCA TCTTCGTCTT CCTGGGGTTC GCGGTGCCGA CCTTCTGGCT GGCGCTGCTC CTCATGTACT TCTTCGGCGT TAAGTTGGGG TGGCTCCCCA TCTCGGGGCT CCACTCTCTG GGGAGCGAGA CACTTTCCCC TATGGCGTGG TTCGTGGATT TGGCGAAGCA CCTGATCCTC CCGGTCTCCG TGGCCACCTT CGGGAGTCTG GCGGGGCTCT CCCGCTACAT GCGCTCCACC ATGCTGGAAG TGATCCGACA GGATTACATC ACCACGGCCC GGGCCAAGGG TCTCACGGAG CGGGCGGTCA TCTACCGGCA CGCCCTGCGC AATGCGCTGC TGCCGGTCAT CACGCTCCTC GGCTTCTCCC TTCCCGGCCT CATCGGGGGG AGCGTCATTT TCGAGACCAT CTTCGCCATC CCCGGCATGG GGCAGCTCTT CTACCAGGGG GTCATGGGGC GGGATTATCC CCTTGTCATG GGAATTCTGG TGATTGGCGC GTTCCTTACC CTTGTCGGCA ATCTCCTGGC CGATCTCTGC TATGCCATGG CCGATCCGCG TATCAGGCAC GGGAGGGGGT AG
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Protein sequence | MVPVLRLMIT YLAKRLIMMV PLLLGITLIS FVVIRLAPGE PVEAMTAMSP KITAETRQRL REFYGLDKPL HVQYATWLKQ VATLDFGRSF APDNRPVTDK IKERIPVTIS LNVIALILEF GLAIPIGIFA ATHRDTLYDK GITIFVFLGF AVPTFWLALL LMYFFGVKLG WLPISGLHSL GSETLSPMAW FVDLAKHLIL PVSVATFGSL AGLSRYMRST MLEVIRQDYI TTARAKGLTE RAVIYRHALR NALLPVITLL GFSLPGLIGG SVIFETIFAI PGMGQLFYQG VMGRDYPLVM GILVIGAFLT LVGNLLADLC YAMADPRIRH GRG
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