| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4130 |
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| Symbol | |
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| ID | 3936619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4239230 |
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| End bp | 4240204 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637906516 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_512072 |
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| Protein GI | 89056621 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGACAT TCCTCGTCAG GCGGTTGTTG CAAAGCATCA TCGTGATGAT CGGCGTGACG
CTGATCAGTT TCATCTCGCT CCAGATCGGG GGCGACCCGA CATATCTGTT CGTGTCCGAG
AACGCGACGA CGGAAGAAAT AGAGGCCGCG CGGATCGCCC TTGGCTTCGA CCGCCCGCTC
CATATTCAAT ACCTCAGCTA TATCTGGGGT GCGTTGCAGG GGGATTTCGG CAACTCGCTC
AGCTACCGGC AACCGGCCAT GGATATCGTA CTGCAGGCCA TGCCCGCCAC CATCGAGCTG
ACCTTCTTCT CTCTCGTCAT CGCGATTGGC CTTTCCGTTC CGCTGGGAAT TTTTGCGGCG
CTGCACCGGG GCAAGCCCAT CGACGGCGGT ATCATGACCA TTGCCATGCT GGGACAGTCG
ATCCCGAATT TTTGGATGGG GATCATGATG TTCCTGTTTT TCGGCCTTTA CCTGGGCTGG
TTTCCCATCT CTGGCAATGA ACCGTTCCTG GAGCCGCTCT TCGAGGGTGA ATTTTCTGAG
GCCTTCACCA ATCTGCCAAG TACCATTCAC CACATGGTTC TGCCCGCCGT GGCCGTAGGC
ACCTACACGC TGGCGCGCAA TGCACGGCTG GTGCGGTCGT CGATGCTGGA GGTTTTGCAG
CAGGATTATG TGCGCACGGC ACGCTCCAAG GGTATTTCCG AGCGTCGCGT CGTCATCAAC
CACGCCATGC GCAATGCCTG GCTGCCCGTC GTGACCATGA TCGGGCTGGA GTTTGGCTTC
CTTCTCGGCG GCGTCGTGGT GGTGGAGACG GTGTTTTCCT ACCCCGGGAT CGGACGGCTG
GTCTTCAACG CGATCAACCA GCGCGACATC CCGGTTGTTC AGGCCTCGGT CATCTTGCTG
GCCGCGATCT TCATCCTCCT GAACCTGATC GTGGACCTCA TCTATGCGCG GCTTGACCCG
CGTGTGAAAT TGTAA
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| Protein sequence | MWTFLVRRLL QSIIVMIGVT LISFISLQIG GDPTYLFVSE NATTEEIEAA RIALGFDRPL
HIQYLSYIWG ALQGDFGNSL SYRQPAMDIV LQAMPATIEL TFFSLVIAIG LSVPLGIFAA
LHRGKPIDGG IMTIAMLGQS IPNFWMGIMM FLFFGLYLGW FPISGNEPFL EPLFEGEFSE
AFTNLPSTIH HMVLPAVAVG TYTLARNARL VRSSMLEVLQ QDYVRTARSK GISERRVVIN
HAMRNAWLPV VTMIGLEFGF LLGGVVVVET VFSYPGIGRL VFNAINQRDI PVVQASVILL
AAIFILLNLI VDLIYARLDP RVKL
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