More than 300 homologs were found in PanDaTox collection
for query gene Caci_5637 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_5637  two component transcriptional regulator, winged helix family  100 
 
 		 224 aa  437  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0682808 
 
 
-
 
NC_013131  Caci_8478  two component transcriptional regulator, winged helix family  41.89 
 
 		 230 aa  155  6e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8200  two component transcriptional regulator, winged helix family  42.08 
 
 		 249 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1539  response regulator receiver protein  45.41 
 
 		 219 aa  143  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.596696  normal  0.26981 
 
 
-
 
NC_014210  Ndas_4514  two component transcriptional regulator, winged helix family  41.89 
 
 		 225 aa  139  3e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.592764 
 
 
-
 
NC_009953  Sare_1693  two component transcriptional regulator  45.29 
 
 		 229 aa  134  9e-31  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000234642 
 
 
-
 
NC_013093  Amir_5698  two component transcriptional regulator, winged helix family  41.74 
 
 		 222 aa  134  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  33 
 
 		 223 aa  131  7.999999999999999e-30  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  33 
 
 		 223 aa  131  7.999999999999999e-30  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  33 
 
 		 223 aa  130  1.0000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_006274  BCZK1193  response regulator  32.5 
 
 		 223 aa  129  3e-29  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  32.5 
 
 		 223 aa  129  3e-29  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_1191  response regulator  32.5 
 
 		 223 aa  129  4.0000000000000003e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  41.76 
 
 		 225 aa  129  4.0000000000000003e-29  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_1447  two component transcriptional regulator, winged helix family  41.86 
 
 		 222 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  32.5 
 
 		 223 aa  129  5.0000000000000004e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  32.5 
 
 		 223 aa  129  5.0000000000000004e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1695  response regulator receiver  44.38 
 
 		 218 aa  128  9.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.747822 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  37.44 
 
 		 228 aa  127  1.0000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  32.5 
 
 		 223 aa  127  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  34.39 
 
 		 223 aa  127  2.0000000000000002e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_013131  Caci_3539  two component transcriptional regulator, winged helix family  41.42 
 
 		 268 aa  126  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.224989  normal  1 
 
 
-
 
NC_007333  Tfu_1238  response regulator receiver  38.21 
 
 		 218 aa  126  3e-28  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  38.29 
 
 		 230 aa  122  3e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal  1 
 
 
-
 
NC_013441  Gbro_2604  response regulator receiver  38.32 
 
 		 244 aa  122  6e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88392  n/a   
 
 
-
 
NC_013441  Gbro_4233  response regulator receiver  38.32 
 
 		 244 aa  122  6e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2050  response regulator receiver  39.29 
 
 		 250 aa  121  9e-27  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3029  two component transcriptional regulator  38.32 
 
 		 265 aa  121  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  1  normal  0.253727 
 
 
-
 
NC_009953  Sare_4990  two component transcriptional regulator  39.71 
 
 		 228 aa  119  3.9999999999999996e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.866601  hitchhiker  0.000134834 
 
 
-
 
NC_009380  Strop_4477  response regulator receiver  39.07 
 
 		 228 aa  119  4.9999999999999996e-26  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.0220713 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  36.36 
 
 		 227 aa  118  6e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_014248  Aazo_2678  winged helix family two component transcriptional regulator  37.43 
 
 		 240 aa  118  7e-26  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_4523  two component transcriptional regulator  38.71 
 
 		 251 aa  118  7e-26  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  40.44 
 
 		 232 aa  117  9.999999999999999e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal  1 
 
 
-
 
NC_011662  Tmz1t_1940  two component transcriptional regulator, winged helix family  43.86 
 
 		 219 aa  117  9.999999999999999e-26  Thauera sp. MZ1T  Bacteria  normal  0.359722  n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  35.5 
 
 		 223 aa  117  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2151  two component transcriptional regulator, winged helix family  39.23 
 
 		 217 aa  116  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000920449  n/a   
 
 
-
 
NC_013172  Bfae_19400  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.5 
 
 		 279 aa  116  1.9999999999999998e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0470356  n/a   
 
 
-
 
NC_013530  Xcel_2485  two component transcriptional regulator, winged helix family  39.67 
 
 		 243 aa  116  1.9999999999999998e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1316  two component transcriptional regulator, winged helix family  40.66 
 
 		 232 aa  116  3e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  37.14 
 
 		 227 aa  116  3e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  39.2 
 
 		 238 aa  116  3e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_009632  SaurJH1_1505  response regulator receiver  37.65 
 
 		 219 aa  115  3.9999999999999997e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.404603  n/a   
 
 
-
 
NC_009487  SaurJH9_1476  two component transcriptional regulator  37.65 
 
 		 219 aa  115  3.9999999999999997e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2656  two component transcriptional regulator  36.49 
 
 		 226 aa  115  6e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.311089  normal  0.831438 
 
 
-
 
NC_009380  Strop_2454  response regulator receiver  37.39 
 
 		 334 aa  115  6e-25  Salinispora tropica CNB-440  Bacteria  normal  0.811467  normal  0.554659 
 
 
-
 
NC_007347  Reut_A0185  DNA-binding response regulator CreB  36.19 
 
 		 226 aa  115  6.9999999999999995e-25  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.54 
 
 		 244 aa  114  8.999999999999998e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.132168 
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  38.55 
 
 		 245 aa  114  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  34.4 
 
 		 231 aa  114  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  39.66 
 
 		 234 aa  114  1.0000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1917  two component transcriptional regulator  32.98 
 
 		 238 aa  114  1.0000000000000001e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.332821 
 
 
-
 
NC_007413  Ava_4914  two component transcriptional regulator  37.43 
 
 		 238 aa  114  1.0000000000000001e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.095278 
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  38.12 
 
 		 245 aa  114  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal  1 
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  39.66 
 
 		 245 aa  114  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  39.66 
 
 		 234 aa  114  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  36.89 
 
 		 230 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.683455 
 
 
-
 
NC_013235  Namu_0949  two component transcriptional regulator, winged helix family  42.03 
 
 		 252 aa  113  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  38.42 
 
 		 234 aa  113  2.0000000000000002e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.85 
 
 		 231 aa  113  2.0000000000000002e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_009953  Sare_4856  two component transcriptional regulator  36.94 
 
 		 229 aa  113  2.0000000000000002e-24  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0324014 
 
 
-
 
NC_013131  Caci_0835  two component transcriptional regulator, winged helix family  39.09 
 
 		 222 aa  113  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  hitchhiker  0.0000000540746 
 
 
-
 
NC_014151  Cfla_1221  two component transcriptional regulator, winged helix family  37.61 
 
 		 256 aa  113  3e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.655279  normal  1 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  41.24 
 
 		 230 aa  112  3e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  34.74 
 
 		 226 aa  113  3e-24  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  36.98 
 
 		 236 aa  113  3e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_013204  Elen_2563  two component transcriptional regulator, winged helix family  36.81 
 
 		 230 aa  112  3e-24  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  41.24 
 
 		 230 aa  113  3e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  37.5 
 
 		 229 aa  112  4.0000000000000004e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_008541  Arth_0587  two component transcriptional regulator  39.23 
 
 		 222 aa  112  4.0000000000000004e-24  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1549  response regulator receiver protein  36.15 
 
 		 241 aa  112  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0273908  normal  1 
 
 
-
 
NC_011772  BCG9842_B2563  transcriptional regulatory protein ResD  30.66 
 
 		 221 aa  112  4.0000000000000004e-24  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.00803163 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  34.96 
 
 		 231 aa  112  5e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_0556  two component transcriptional regulator  36.07 
 
 		 237 aa  112  5e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  0.451756  normal  1 
 
 
-
 
NC_014158  Tpau_1046  two component transcriptional regulator, winged helix family  39.23 
 
 		 230 aa  112  6e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0213528  n/a   
 
 
-
 
NC_007951  Bxe_A0699  two component transcriptional regulator  39.62 
 
 		 220 aa  112  6e-24  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  36.94 
 
 		 235 aa  111  7.000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2424  two component transcriptional regulator  30.66 
 
 		 221 aa  111  8.000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0245011  n/a   
 
 
-
 
NC_011886  Achl_0715  two component transcriptional regulator, winged helix family  40 
 
 		 224 aa  111  8.000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013173  Dbac_2095  two component transcriptional regulator, winged helix family  36.89 
 
 		 229 aa  111  8.000000000000001e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_013171  Apre_1374  two component transcriptional regulator, winged helix family  32.39 
 
 		 219 aa  111  8.000000000000001e-24  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.0000555295  n/a   
 
 
-
 
NC_014248  Aazo_2507  winged helix family two component transcriptional regulator  33.5 
 
 		 233 aa  111  9e-24  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_09340  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.29 
 
 		 223 aa  110  1.0000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.217912  normal  0.763127 
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  31.76 
 
 		 231 aa  111  1.0000000000000001e-23  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  36.71 
 
 		 242 aa  110  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.114994 
 
 
-
 
NC_003909  BCE_2749  transcription response regulator-like protein  31.13 
 
 		 221 aa  110  2.0000000000000002e-23  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00061025  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  37.81 
 
 		 261 aa  110  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_007404  Tbd_0136  two component transcriptional regulator  38.24 
 
 		 220 aa  110  2.0000000000000002e-23  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.235991  normal  1 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  36.24 
 
 		 223 aa  110  2.0000000000000002e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_3379  two component heavy metal response transcriptional regulator  34.15 
 
 		 223 aa  110  2.0000000000000002e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  40.11 
 
 		 230 aa  110  2.0000000000000002e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  38.64 
 
 		 225 aa  110  2.0000000000000002e-23  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011729  PCC7424_4236  two component transcriptional regulator, winged helix family  34.17 
 
 		 241 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  32.39 
 
 		 230 aa  110  2.0000000000000002e-23  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  36.14 
 
 		 227 aa  109  3e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013421  Pecwa_4016  DNA-binding transcriptional regulator BasR  37.7 
 
 		 222 aa  110  3e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  0.727043  n/a   
 
 
-
 
NC_012560  Avin_24530  Response regulator KdpE  35.56 
 
 		 232 aa  110  3e-23  Azotobacter vinelandii DJ  Bacteria  normal  0.0689152  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  36.19 
 
 		 225 aa  109  3e-23  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_3430  two component transcriptional regulator, winged helix family  35.23 
 
 		 231 aa  109  3e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  36.28 
 
 		 226 aa  109  4.0000000000000004e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
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