| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1940 |
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| Symbol | |
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| ID | 7084408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2182192 |
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| End bp | 2182851 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643698965 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002355587 |
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| Protein GI | 217970353 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.359722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC TGCTCGTCGA GGATGATGCC GCGCTCGGCG AGGGCATCCG CGTCGCGCTC
AAGCCCGAGG CCTATACGGT CGACTGGGTG CAGGACGGTG CGAGCGCGCT GCATGCGCTC
ACCCACGAGG ACTTCGCGCT CGCCGTGCTC GACCTCGGCC TGCCGCGCAT GGATGGCCTG
CAGGTGCTGC AGCGCCTGCG CGCCGCCGCC AACCCGGTGC CGGTGCTGGT GCTCACCGCG
CGCGACGCCA CCAGCGACCG CATCGCGGGA CTGGACGCGG GGGCGGACGA CTACCTCGTC
AAGCCCTTCG ACGTCGACGA GCTCAAGGCC CGCATCCGCG CGCTGCTGCG ACGCAGCGCC
AATCGTGCGC AGCCGGTGCT GCACCACGGC GAGGTCGTCC TCGATCCGGT GAACCAGCAG
GTCAGCTACC GCGGCCAGCC GGTGGTCCTG CAGCGCAAGG AGTTCCTGCT GCTGCACGAG
CTGCTCACCC AGCCCGGCCG CGTGCTGACC CGCGATCGGC TGCAGCAGGC CTTGTACGGC
TGGGGCGAGG AGGCCGAGAG CAATACGCTC GAGGTGCATA TCCACCATCT GCGGCGCAAG
CTGTTTCCCG AGCTGATCCG CACCGTGCGC GGCGTGGGCT ATCTGGCGGA CAAGGCCTGA
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| Protein sequence | MRILLVEDDA ALGEGIRVAL KPEAYTVDWV QDGASALHAL THEDFALAVL DLGLPRMDGL
QVLQRLRAAA NPVPVLVLTA RDATSDRIAG LDAGADDYLV KPFDVDELKA RIRALLRRSA
NRAQPVLHHG EVVLDPVNQQ VSYRGQPVVL QRKEFLLLHE LLTQPGRVLT RDRLQQALYG
WGEEAESNTL EVHIHHLRRK LFPELIRTVR GVGYLADKA
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