Gene Amir_2151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2151 
Symbol 
ID8326340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2375993 
End bp2376646 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content74% 
IMG OID644942701 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003099942 
Protein GI256376282 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000920449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGTGC TGCTCGTGGA GGACGACGAC GGCGTCGCCG ACGCCCTCGT GGAGGCGTTG 
CGCGACCACG GCCACCGGGT GCTCCGGGTC AGCCGGGGAA CCGACGCCCT GTTGTCCCAC
CGGGACCACG ACCTGGTCCT CCTGGACCTG GGCCTGCCGG ACGTGGACGG CCTGGACGTG
CTGCGCAAGC TGCGCCTGGT GGCCTCCTCC CCCGTGCTCG TGCTGACCGC GCGCGGTGAC
GAGCGGTCCG TCGTCCGGGG CCTGCGCCTG GGCGCCGACG ACTACCTCGT CAAACCCGTC
CGCCTCGGCG AGCTCCTGGC CCGCATGGAC GCGGTGGCGA GGCGCACAGC CGTGACGAGC
ACGACAGAGC ACGTGCACGT CTCCGACGTC GAGATCGACC TCCCCGGCAG GCGCGTGCTG
GTCGCGGGCG CCGAGGCGAA GCTCACCGCC AAGGAGTTCG CGATCCTCGC CGCGCTCGCC
AGCCGCGCGG GCACCGCCGT CAGCAGGCAG CAGCTCATGG ACGAGGTCTG GGGCGACGCC
TACCTCGCGG TCTCCCGCTC CCTGGACGTG CACCTGGCCA GCCTCCGCGT CAAGCTGGCC
CGCCCCGGCC TGATCACCAC GATCCGGGGC TTCGGCTACC GGTTGGGCGG CTGA
 
Protein sequence
MRVLLVEDDD GVADALVEAL RDHGHRVLRV SRGTDALLSH RDHDLVLLDL GLPDVDGLDV 
LRKLRLVASS PVLVLTARGD ERSVVRGLRL GADDYLVKPV RLGELLARMD AVARRTAVTS
TTEHVHVSDV EIDLPGRRVL VAGAEAKLTA KEFAILAALA SRAGTAVSRQ QLMDEVWGDA
YLAVSRSLDV HLASLRVKLA RPGLITTIRG FGYRLGG