More than 300 homologs were found in PanDaTox collection
for query gene Strop_4477 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_4477  response regulator receiver  100 
 
 
228 aa  438  9.999999999999999e-123  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0220713 
 
 
-
 
NC_009953  Sare_4990  two component transcriptional regulator  93.86 
 
 
228 aa  413  1e-114  Salinispora arenicola CNS-205  Bacteria  normal  0.866601  hitchhiker  0.000134834 
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  64.63 
 
 
230 aa  283  2.0000000000000002e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal 
 
 
-
 
NC_009921  Franean1_1612  two component transcriptional regulator  59.68 
 
 
259 aa  258  4e-68  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00249249  normal 
 
 
-
 
NC_013235  Namu_0949  two component transcriptional regulator, winged helix family  61.57 
 
 
252 aa  249  2e-65  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  50.91 
 
 
225 aa  208  6e-53  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  50.45 
 
 
225 aa  206  3e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  50.23 
 
 
237 aa  201  7e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2485  two component transcriptional regulator, winged helix family  51.97 
 
 
243 aa  201  8e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  48.42 
 
 
226 aa  200  9.999999999999999e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  52.23 
 
 
230 aa  199  3e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_013441  Gbro_2604  response regulator receiver  51.11 
 
 
244 aa  199  3.9999999999999996e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88392  n/a   
 
 
-
 
NC_013441  Gbro_4233  response regulator receiver  51.11 
 
 
244 aa  199  3.9999999999999996e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.67 
 
 
227 aa  198  5e-50  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  45.95 
 
 
226 aa  196  3e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1221  two component transcriptional regulator, winged helix family  52.1 
 
 
256 aa  194  9e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.655279  normal 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  48.42 
 
 
225 aa  192  2e-48  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  43.11 
 
 
235 aa  193  2e-48  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  47.06 
 
 
225 aa  192  3e-48  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  45.91 
 
 
234 aa  192  5e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  41.96 
 
 
234 aa  190  1e-47  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  46.4 
 
 
228 aa  191  1e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.5 
 
 
244 aa  190  2e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.132168 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  49.32 
 
 
228 aa  189  2.9999999999999997e-47  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  50.45 
 
 
237 aa  189  2.9999999999999997e-47  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  50.45 
 
 
235 aa  189  4e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  44.89 
 
 
230 aa  189  4e-47  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  47.09 
 
 
226 aa  188  5.999999999999999e-47  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  41.78 
 
 
236 aa  188  5.999999999999999e-47  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_009972  Haur_4156  two component transcriptional regulator  48.66 
 
 
232 aa  187  8e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000307056  n/a   
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  49.55 
 
 
232 aa  188  8e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  46.26 
 
 
239 aa  187  1e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  2e-46  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013595  Sros_1549  response regulator receiver protein  52.44 
 
 
241 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0273908  normal 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  43.5 
 
 
235 aa  187  2e-46  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_014158  Tpau_0093  two component transcriptional regulator, winged helix family  50.45 
 
 
232 aa  186  2e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  52.25 
 
 
225 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  43.5 
 
 
235 aa  187  2e-46  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  3e-46  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  3e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  3e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  43.5 
 
 
235 aa  186  3e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  43.5 
 
 
235 aa  186  3e-46  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  49.77 
 
 
225 aa  186  3e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  3e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  43.5 
 
 
235 aa  186  3e-46  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_008043  TM1040_3335  two component transcriptional regulator  46.12 
 
 
230 aa  186  4e-46  Ruegeria sp. TM1040  Bacteria  normal  normal  0.428008 
 
 
-
 
NC_013172  Bfae_19400  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.33 
 
 
279 aa  185  4e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0470356  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  51.13 
 
 
231 aa  185  5e-46  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_008541  Arth_1441  two component transcriptional regulator  50.45 
 
 
247 aa  185  6e-46  Arthrobacter sp. FB24  Bacteria  normal  0.167327  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  49.33 
 
 
226 aa  185  6e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  50.45 
 
 
229 aa  185  6e-46  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  42.48 
 
 
232 aa  185  6e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  43.05 
 
 
235 aa  184  7e-46  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013204  Elen_2866  two component transcriptional regulator, winged helix family  44.3 
 
 
231 aa  184  9e-46  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  46.4 
 
 
225 aa  184  9e-46  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3537  two component transcriptional regulator, winged helix family  50.22 
 
 
237 aa  183  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.555413 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  48.43 
 
 
229 aa  183  2.0000000000000003e-45  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  49.55 
 
 
229 aa  183  2.0000000000000003e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  47.96 
 
 
229 aa  183  2.0000000000000003e-45  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  44.8 
 
 
226 aa  183  2.0000000000000003e-45  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  43.56 
 
 
233 aa  183  2.0000000000000003e-45  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  43.17 
 
 
230 aa  182  3e-45  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  48.46 
 
 
232 aa  182  3e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  40.35 
 
 
236 aa  182  4.0000000000000006e-45  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  47.75 
 
 
231 aa  182  4.0000000000000006e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_013170  Ccur_02230  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.29 
 
 
229 aa  182  4.0000000000000006e-45  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1099  two component transcriptional regulator, winged helix family  51.14 
 
 
225 aa  182  5.0000000000000004e-45  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  49.32 
 
 
230 aa  182  5.0000000000000004e-45  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008699  Noca_0312  response regulator receiver  50.22 
 
 
233 aa  182  5.0000000000000004e-45  Nocardioides sp. JS614  Bacteria  normal  0.0102436  n/a   
 
 
-
 
NC_007347  Reut_A0185  DNA-binding response regulator CreB  46.22 
 
 
226 aa  181  6e-45  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  46.36 
 
 
257 aa  181  7e-45  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  40.61 
 
 
239 aa  181  7e-45  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  41.7 
 
 
230 aa  181  7e-45  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  41.05 
 
 
239 aa  181  8.000000000000001e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  41.05 
 
 
239 aa  181  8.000000000000001e-45  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_008703  Mkms_5700  two component transcriptional regulator  49.57 
 
 
246 aa  181  8.000000000000001e-45  Mycobacterium sp. KMS  Bacteria  normal  0.663569  normal  0.593468 
 
 
-
 
NC_009339  Mflv_5309  two component transcriptional regulator  49.57 
 
 
246 aa  181  8.000000000000001e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.383621  normal  0.611504 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.19 
 
 
226 aa  181  1e-44  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  46.12 
 
 
241 aa  181  1e-44  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_008048  Sala_0821  two component transcriptional regulator  47.53 
 
 
232 aa  181  1e-44  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.60557  hitchhiker  0.00503775 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  48.25 
 
 
242 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.114994 
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  47.35 
 
 
232 aa  181  1e-44  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  40.35 
 
 
238 aa  181  1e-44  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0721  two component transcriptional regulator, winged helix family  48.1 
 
 
233 aa  180  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.811558  normal 
 
 
-
 
NC_008726  Mvan_3674  two component transcriptional regulator  50 
 
 
246 aa  180  1e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.027909  normal 
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  47.32 
 
 
230 aa  180  1e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  45.05 
 
 
225 aa  180  2e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0753  putative response regulator  46.43 
 
 
240 aa  180  2e-44  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  47.75 
 
 
229 aa  179  2e-44  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  45.09 
 
 
226 aa  180  2e-44  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  40.09 
 
 
228 aa  180  2e-44  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  44.69 
 
 
236 aa  179  2e-44  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0114  two component transcriptional regulator  51.8 
 
 
229 aa  179  2e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.994086  normal 
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  45.21 
 
 
228 aa  179  2.9999999999999997e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  43.81 
 
 
235 aa  179  2.9999999999999997e-44  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0912  DNA-binding response regulator CreB  49.15 
 
 
236 aa  179  4e-44  Burkholderia sp. 383  Bacteria  normal  0.40948  normal 
 
 
-
 
NC_009800  EcHS_A4634  DNA-binding response regulator CreB  46.22 
 
 
229 aa  179  4e-44  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  40.17 
 
 
239 aa  178  4.999999999999999e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1230  two component transcriptional regulator, winged helix family  47.13 
 
 
254 aa  178  5.999999999999999e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211629  normal  0.177188 
 
 
-
 
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