| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3539 |
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| Symbol | |
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| ID | 8334892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3952831 |
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| End bp | 3953637 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956682 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003114285 |
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| Protein GI | 256392721 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.224989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACG AGCTTGTCCG GCCGGGCACC GCGATCGCGC CCCACGACCG GACGATCCTC
CCGACACACC CCGCGCGGCG GGCCGTACCC GATCCGCCCG GCCGCGCCCC GGTGCTCTAC
TCCTCGCTGG TCCGGCCCGC GCTGCGGATC CTGGTCGCCG AGCCGGACCC GGACAGCGCC
GAGCAGCTTC TCAGGAAGCT GCGACGCCAG GGGCACCGGG CCGAGGTGGT GCACACCGGG
GACAAGGCGC TGATCGAGTT CCCCTCGGCG GACCTGGTGC TGCTCGATCT GGAACTGCCC
GACGTGGACG GGCTGGAGAT CTGCCGCGGC ATCCGGGCGG TCAGCGACGT GGCGATCATC
ACCGTCTCCG AGCGCGCCGA GGAGATCGAC TGCGTGCTCG GCTTACAGGC CGGGTCCGAC
GACTACCTCG TCAAACCCTA CGGCTTCCGC GAGCTGATGG CGCGGATCGA CGCGGTGATG
CGCCGCATCC GGCCCGGCGC CGTCCGGGAC CGGGTGATCG CGCACGGCCG GCTGCTCATC
GACGCCGGCT GCCGCGAGGT CCGGATCGGC GGGCAGGTGG TCGGCGTCAC CCGCAAGGAG
TTCGACCTGC TGCTCCTGCT CGCCTCCCAG CCCGGCACGG TGATCTCCCG GCAGCAGATC
ATGTCGCAGA TCTGGCAGGA CGTCTGGTCG GAGTCGACAC GGACCATCGA CACCCATGTC
AGCAGTCTGC GATCCAAGCT CGGATCAGGG TCCTGGATCG TCACCGTCCG CGGCGTCGGG
TTCCAGCTGG GGACCGCCCC GGACTAG
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| Protein sequence | MANELVRPGT AIAPHDRTIL PTHPARRAVP DPPGRAPVLY SSLVRPALRI LVAEPDPDSA
EQLLRKLRRQ GHRAEVVHTG DKALIEFPSA DLVLLDLELP DVDGLEICRG IRAVSDVAII
TVSERAEEID CVLGLQAGSD DYLVKPYGFR ELMARIDAVM RRIRPGAVRD RVIAHGRLLI
DAGCREVRIG GQVVGVTRKE FDLLLLLASQ PGTVISRQQI MSQIWQDVWS ESTRTIDTHV
SSLRSKLGSG SWIVTVRGVG FQLGTAPD
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