| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3029 |
|---|
| Symbol | |
|---|
| ID | 3904382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3595675 |
|---|
| End bp | 3596472 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637880349 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_482115 |
|---|
| Protein GI | 86741715 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.253727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGC TTGCAGGCAA CGGCTCCCGA GCACACGCAT CAGACCTGCA GCGGTATCCC
GATCCCGCCG GCGCCCGGGT ACTGGTGGTC GAGGACGACG ACGGCCTCGG TACCCAGCTC
GTGCGCGGTC TGGACCGGGC CGGCTACACC GCCGACCGGG TGCGGACCGG GGAGGCCGCG
CTCGCCCGGG TCGAGGGCGT GTCCCCGCCC GACCTCGTGC TCCTGGACCT GGGGCTGCCC
GACATCGACG GCGCGGAGGT GTGCCGGCGC ATCCGCGAGC GCGGGGACAC CCCCGTGATC
GTGGTGACGG CTCGGGGGGA CGAGGCGGAC CGGGTCGAGG CCTTGGACCT CGGTTCCGAC
GACTACCTGG TCAAACCATT CGGATTCGCC GAACTGCTGG CCCGGATACG GGCGGTGCGG
CGGCGCGCCG CCCGGGCCAC CGGTGAGAGC TCCGACGTGG TCCGGCACGG ACCGCTCGTC
CTCGACCGGC GCAGCCGGCG GATCTCCGTC GACGGCCGTC CGGTCCAGGT GACGGCGCGG
GAGTACGATC TGCTGGCCTT CCTGGCCCGC GATCCCGGCC GGGTCCGGAC CCGACGGGAG
ATCTTCACCG CTGTCTGGGG CGACTGGTTC GGCTCATCGA AGGTCCTCGA CGTACACATC
GGCGCGATCC GCCGCAAGCT CGGGATTCCC GAACTGATCG AAACGGTGTA CGGGGTCGGC
TTCCGCCTGG GCGGGCCGCC GACACCCGGC GCCGATCCGA CCCCCGGTGA CCGGAGCGCG
CCACCCCTCG GCCGATGA
|
|---|
| Protein sequence | MATLAGNGSR AHASDLQRYP DPAGARVLVV EDDDGLGTQL VRGLDRAGYT ADRVRTGEAA
LARVEGVSPP DLVLLDLGLP DIDGAEVCRR IRERGDTPVI VVTARGDEAD RVEALDLGSD
DYLVKPFGFA ELLARIRAVR RRAARATGES SDVVRHGPLV LDRRSRRISV DGRPVQVTAR
EYDLLAFLAR DPGRVRTRRE IFTAVWGDWF GSSKVLDVHI GAIRRKLGIP ELIETVYGVG
FRLGGPPTPG ADPTPGDRSA PPLGR
|
|---|
| |