Gene Avin_24530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24530 
SymbolkdpE 
ID7761367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2450767 
End bp2451465 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID643805336 
ProductResponse regulator KdpE 
Protein accessionYP_002799613 
Protein GI226944540 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0689152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG TGCAGCAAAG CATCCTGGTG ATCGACGACG AGGCGCAGAT CCGCAAGTTC 
CTGCGCATCA GCCTCGTCGC CCACGGTTAC CGGGTACTGG AGGCCGGCTG CGGTCGCGAG
GGGCTGACGC TGGCGGCCGA GGCGCGGCCC GATCTGCTGG TGCTCGATCT GGGGCTGCCG
GACATGGACG GCAAGGAACT GCTCGCCGAA CTGCGGCGCG ACTCCCAGGT GCCGGTGCTG
GTGCTTTCGG TACGTGCCGG CGACGGCGAG AAGGTACTGG CGCTGGACGG CGGCGCCAAC
GACTACGTGA CCAAGCCCTT CAGCATCCGT GAGCTGCTCG CCCGGGTGCG CGTGCTGCTG
CGCCGGCCGG CTTCGCCCGG ACAGGGGCCG GGCACGCTGA ACTGCGGCCC GCTGGCGGTG
GATCTGGACA ACCGGCGGGT CGACCTCGAC GGCCGGGAAA TCGCCCTGAC GCGCAAGGAG
TACGACGTGC TGGCCATGCT CGCCCGCCAT CCGGGGCGCA TCGTCACCCA GCAGCAGTTG
CTCAGGGATA TCTGGGGGCC GACCCATGTC GAGGACAGCC ATTACCTGCG GGTGGTGGTC
GGTCACCTGC GCCAGAAGCT CGGCGACGAT CCCGCCGATC CCCGTTTCAT CGTCACCGAG
GCGGGCATCG GTTACCGCCT GCGCGAGCAG GCCCCGTGA
 
Protein sequence
MSGVQQSILV IDDEAQIRKF LRISLVAHGY RVLEAGCGRE GLTLAAEARP DLLVLDLGLP 
DMDGKELLAE LRRDSQVPVL VLSVRAGDGE KVLALDGGAN DYVTKPFSIR ELLARVRVLL
RRPASPGQGP GTLNCGPLAV DLDNRRVDLD GREIALTRKE YDVLAMLARH PGRIVTQQQL
LRDIWGPTHV EDSHYLRVVV GHLRQKLGDD PADPRFIVTE AGIGYRLREQ AP