More than 300 homologs were found in PanDaTox collection
for query gene CPF_2898 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  100 
 
 
349 aa  712    Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  99.14 
 
 
349 aa  707    Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  59.42 
 
 
351 aa  453  1.0000000000000001e-126  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  59.03 
 
 
357 aa  436  1e-121  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  56.73 
 
 
364 aa  408  1e-113  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  56.57 
 
 
359 aa  410  1e-113  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  56.82 
 
 
360 aa  405  1.0000000000000001e-112  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  53.56 
 
 
361 aa  403  1e-111  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  53.89 
 
 
368 aa  400  9.999999999999999e-111  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  54.57 
 
 
364 aa  399  9.999999999999999e-111  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  57.02 
 
 
356 aa  397  1e-109  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  53.28 
 
 
359 aa  395  1e-109  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  54.55 
 
 
359 aa  393  1e-108  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  52.01 
 
 
366 aa  382  1e-105  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  53.74 
 
 
365 aa  382  1e-105  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  53.74 
 
 
365 aa  383  1e-105  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  53.57 
 
 
376 aa  384  1e-105  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  53.74 
 
 
365 aa  382  1e-105  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  53.58 
 
 
365 aa  382  1e-105  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  52.42 
 
 
358 aa  383  1e-105  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  53.74 
 
 
365 aa  382  1e-105  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  54.02 
 
 
365 aa  384  1e-105  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  53.74 
 
 
356 aa  382  1e-105  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  52.44 
 
 
351 aa  383  1e-105  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  53.45 
 
 
365 aa  381  1e-104  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  53.45 
 
 
365 aa  381  1e-104  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  53.52 
 
 
368 aa  380  1e-104  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  54.02 
 
 
373 aa  380  1e-104  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  53.45 
 
 
365 aa  381  1e-104  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  53.45 
 
 
365 aa  381  1e-104  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  50.86 
 
 
362 aa  378  1e-104  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  53.71 
 
 
364 aa  374  1e-102  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  49.86 
 
 
357 aa  372  1e-102  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  51.86 
 
 
359 aa  368  1e-101  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  53.13 
 
 
374 aa  370  1e-101  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  50.14 
 
 
383 aa  368  1e-100  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  51.27 
 
 
369 aa  367  1e-100  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  51.77 
 
 
374 aa  364  1e-99  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  50.29 
 
 
358 aa  363  2e-99  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  51.27 
 
 
367 aa  364  2e-99  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  52.32 
 
 
373 aa  363  3e-99  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  51.27 
 
 
369 aa  362  8e-99  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  52.04 
 
 
373 aa  361  1e-98  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  52.17 
 
 
374 aa  360  2e-98  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  52.17 
 
 
374 aa  360  3e-98  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  50.28 
 
 
367 aa  359  3e-98  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  48.23 
 
 
376 aa  359  5e-98  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  50.99 
 
 
369 aa  358  9.999999999999999e-98  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  47.83 
 
 
391 aa  357  1.9999999999999998e-97  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  51.27 
 
 
352 aa  356  2.9999999999999997e-97  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  50 
 
 
366 aa  356  3.9999999999999996e-97  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  50 
 
 
366 aa  356  3.9999999999999996e-97  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  48.49 
 
 
375 aa  355  8.999999999999999e-97  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  49.86 
 
 
371 aa  354  1e-96  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  47.49 
 
 
368 aa  354  1e-96  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  46.85 
 
 
377 aa  352  4e-96  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  49 
 
 
362 aa  352  5e-96  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  51.63 
 
 
373 aa  352  5.9999999999999994e-96  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  49.14 
 
 
357 aa  347  2e-94  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  49.02 
 
 
366 aa  347  2e-94  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  48.91 
 
 
389 aa  346  4e-94  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  47.16 
 
 
362 aa  345  5e-94  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  48.03 
 
 
399 aa  345  8.999999999999999e-94  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  47.83 
 
 
375 aa  344  1e-93  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  48.85 
 
 
361 aa  344  1e-93  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  49.17 
 
 
372 aa  343  2.9999999999999997e-93  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  49 
 
 
354 aa  343  2.9999999999999997e-93  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  45.88 
 
 
372 aa  342  4e-93  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  48.52 
 
 
380 aa  342  5e-93  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  47.88 
 
 
364 aa  341  1e-92  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  46.72 
 
 
386 aa  340  2.9999999999999998e-92  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  47.68 
 
 
379 aa  339  4e-92  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.59 
 
 
384 aa  339  5e-92  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  47.96 
 
 
380 aa  338  5.9999999999999996e-92  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  47.43 
 
 
388 aa  338  8e-92  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  46.58 
 
 
369 aa  338  9.999999999999999e-92  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  48.92 
 
 
381 aa  338  9.999999999999999e-92  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  47.03 
 
 
364 aa  337  1.9999999999999998e-91  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  46.63 
 
 
386 aa  337  1.9999999999999998e-91  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  48.25 
 
 
379 aa  337  1.9999999999999998e-91  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  45.33 
 
 
373 aa  337  1.9999999999999998e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  49.32 
 
 
376 aa  336  2.9999999999999997e-91  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  47.12 
 
 
373 aa  336  2.9999999999999997e-91  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  45.33 
 
 
373 aa  336  3.9999999999999995e-91  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  48.26 
 
 
347 aa  335  9e-91  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  45.33 
 
 
373 aa  334  2e-90  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  46.85 
 
 
374 aa  333  3e-90  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  46.85 
 
 
391 aa  333  3e-90  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  45.48 
 
 
385 aa  333  4e-90  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  46.15 
 
 
363 aa  332  7.000000000000001e-90  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  46.7 
 
 
388 aa  331  9e-90  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  46.17 
 
 
394 aa  330  2e-89  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  46.77 
 
 
402 aa  330  3e-89  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0322598 
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  45.95 
 
 
378 aa  327  1.0000000000000001e-88  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  48.53 
 
 
416 aa  326  3e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  46.28 
 
 
376 aa  326  3e-88  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  46.45 
 
 
380 aa  326  5e-88  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  46.45 
 
 
380 aa  326  5e-88  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  45.04 
 
 
364 aa  325  7e-88  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  46.01 
 
 
390 aa  324  1e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
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