More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_04747 on replicon NC_009784
Organism: Vibrio harveyi ATCC BAA-1116



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  100 
 
 
361 aa  736    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  80.06 
 
 
362 aa  600  1.0000000000000001e-171  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0524  methyl-accepting chemotaxis protein  55.52 
 
 
367 aa  379  1e-104  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1144  methyl-accepting chemotaxis protein  46.69 
 
 
362 aa  331  1e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3981  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
362 aa  329  3e-89  Marinomonas sp. MWYL1  Bacteria  normal  0.684526  normal  0.542266 
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
362 aa  330  3e-89  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
362 aa  328  6e-89  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3397  methyl-accepting chemotaxis sensory transducer  46.8 
 
 
362 aa  327  3e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3522  methyl-accepting chemotaxis sensory transducer  46.8 
 
 
362 aa  327  3e-88  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3301  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
362 aa  324  1e-87  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1055  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
362 aa  324  1e-87  Shewanella baltica OS223  Bacteria  normal  0.0655525  hitchhiker  0.0000230906 
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  46.96 
 
 
362 aa  323  2e-87  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  45.81 
 
 
360 aa  318  7.999999999999999e-86  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0970  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
362 aa  310  2.9999999999999997e-83  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2964  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
361 aa  271  1e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3320  putative methyl-accepting chemotaxis protein  33.33 
 
 
351 aa  183  4.0000000000000006e-45  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.781767  normal 
 
 
-
 
NC_011083  SeHA_C3384  putative methyl-accepting chemotaxis protein  33.33 
 
 
352 aa  183  4.0000000000000006e-45  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.644477  normal  0.732859 
 
 
-
 
NC_011205  SeD_A3483  putative methyl-accepting chemotaxis protein  33.33 
 
 
352 aa  183  4.0000000000000006e-45  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3390  putative methyl-accepting chemotaxis protein  33.33 
 
 
351 aa  183  4.0000000000000006e-45  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.927334 
 
 
-
 
NC_011149  SeAg_B3310  putative methyl-accepting chemotaxis protein  33.33 
 
 
352 aa  183  4.0000000000000006e-45  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.740696  n/a   
 
 
-
 
NC_007298  Daro_2497  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
372 aa  170  5e-41  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.854874 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  32.88 
 
 
360 aa  167  2e-40  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
442 aa  154  2e-36  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_011662  Tmz1t_0416  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
366 aa  149  9e-35  Thauera sp. MZ1T  Bacteria  normal  0.217637  n/a   
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  40.24 
 
 
440 aa  140  3.9999999999999997e-32  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  31.27 
 
 
365 aa  139  1e-31  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  31.91 
 
 
365 aa  137  4e-31  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
720 aa  133  3.9999999999999996e-30  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
483 aa  130  3e-29  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  30.53 
 
 
375 aa  128  1.0000000000000001e-28  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
421 aa  128  2.0000000000000002e-28  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
720 aa  127  3e-28  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
658 aa  127  4.0000000000000003e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  28.08 
 
 
365 aa  125  1e-27  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  31.58 
 
 
483 aa  123  5e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0922  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
495 aa  122  8e-27  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
674 aa  120  4.9999999999999996e-26  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011830  Dhaf_4430  methyl-accepting chemotaxis sensory transducer  30.33 
 
 
641 aa  119  6e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  33.98 
 
 
447 aa  117  3e-25  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  31.17 
 
 
360 aa  117  3.9999999999999997e-25  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1216  methyl-accepting chemotaxis sensory transducer  30.61 
 
 
452 aa  113  4.0000000000000004e-24  Marinobacter aquaeolei VT8  Bacteria  normal  0.133682  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
635 aa  113  4.0000000000000004e-24  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
632 aa  112  1.0000000000000001e-23  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  27.3 
 
 
645 aa  111  2.0000000000000002e-23  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1836  methyl-accepting chemotaxis sensory transducer  29.35 
 
 
359 aa  111  2.0000000000000002e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.126283  normal  0.522282 
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  29.63 
 
 
483 aa  110  3e-23  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
700 aa  110  3e-23  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
664 aa  108  1e-22  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.62 
 
 
1170 aa  105  2e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  29.68 
 
 
700 aa  104  2e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  29.48 
 
 
357 aa  103  5e-21  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  30.24 
 
 
1079 aa  102  7e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0372  methyl-accepting chemotaxis protein  40 
 
 
465 aa  102  7e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  52.25 
 
 
356 aa  102  1e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  44.03 
 
 
458 aa  102  1e-20  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  42.6 
 
 
572 aa  102  1e-20  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
578 aa  101  2e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  45.86 
 
 
479 aa  100  3e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
668 aa  99.8  7e-20  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  31.78 
 
 
407 aa  99.8  7e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
579 aa  99.8  7e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  44.44 
 
 
520 aa  99.8  7e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  26.56 
 
 
777 aa  99.4  8e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  34.62 
 
 
433 aa  99  1e-19  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_007575  Suden_0988  methyl-accepting chemotaxis sensory transducer  29.54 
 
 
652 aa  99  1e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  43.44 
 
 
533 aa  98.2  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  42.45 
 
 
520 aa  97.8  2e-19  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
572 aa  97.8  2e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
520 aa  98.6  2e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0818  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.97 
 
 
438 aa  98.2  2e-19  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
589 aa  97.4  3e-19  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_008228  Patl_4181  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
498 aa  97.4  3e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.07397  n/a   
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  29.63 
 
 
361 aa  97.8  3e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_013522  Taci_0556  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.35 
 
 
690 aa  97.4  3e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  52.53 
 
 
519 aa  97.4  3e-19  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  41.91 
 
 
533 aa  97.4  3e-19  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009439  Pmen_2974  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
460 aa  97.4  3e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.200834 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
678 aa  97.1  4e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  35.71 
 
 
539 aa  97.1  4e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0779  methyl-accepting chemotaxis transducer/sensory box protein  43.26 
 
 
446 aa  97.1  4e-19  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  33.04 
 
 
600 aa  97.1  4e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0804  methyl-accepting chemotaxis sensory transducer  43.26 
 
 
438 aa  97.1  4e-19  Pseudomonas putida F1  Bacteria  normal  normal  0.0800012 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.91 
 
 
533 aa  97.4  4e-19  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  33.85 
 
 
586 aa  97.1  4e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_013522  Taci_0323  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.35 
 
 
690 aa  97.4  4e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3371  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
440 aa  97.1  4e-19  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0309  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.67 
 
 
677 aa  97.1  5e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.000000502143  n/a   
 
 
-
 
NC_009665  Shew185_0972  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
440 aa  96.7  5e-19  Shewanella baltica OS185  Bacteria  normal  0.803806  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
584 aa  96.7  5e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  37.69 
 
 
667 aa  96.7  6e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
707 aa  96.7  6e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
514 aa  96.7  6e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  29.96 
 
 
601 aa  96.7  6e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1752  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
897 aa  96.7  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.10138  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  60.71 
 
 
514 aa  96.7  6e-19  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
554 aa  96.3  7e-19  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  43.61 
 
 
504 aa  96.3  7e-19  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  36.42 
 
 
559 aa  96.3  7e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
552 aa  96.3  7e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
583 aa  96.3  7e-19  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>